The SHOCT Domain: A Widespread Domain Under-Represented in Model Organisms

Tekijä Eberhardt, Ruth Y., Bartholdson, S. Josefin, Punta, Marco, Bateman, Alex
Julkaistu 2013

AntiFam: a tool to help identify spurious ORFs in protein annotation

Tekijä Eberhardt, Ruth Y., Haft, Daniel H., Punta, Marco, Martin, Maria, O'Donovan, Claire, Bateman, Alex
Julkaistu 2012

Structure- and context-based analysis of the GxGYxYP family reveals a new putative class of Glycoside Hydrolase

Tekijä Rigden, Daniel J, Eberhardt, Ruth Y, Gilbert, Harry J, Xu, Qingping, Chang, Yuanyuan, Godzik, Adam
Julkaistu 2014

The first structure in a family of peptidase inhibitors reveals an unusual Ig-like fold

Tekijä Rigden, Daniel J, Xu, Qingping, Chang, Yuanyuan, Eberhardt, Ruth Y, Finn, Robert D, Rawlings, Neil D
Julkaistu 2013

The challenge of increasing Pfam coverage of the human proteome

Tekijä Mistry, Jaina, Coggill, Penny, Eberhardt, Ruth Y., Deiana, Antonio, Giansanti, Andrea, Finn, Robert D., Bateman, Alex, Punta, Marco
Julkaistu 2013

The challenge of increasing Pfam coverage of the human proteome

Tekijä Mistry, Jaina, Coggill, Penny, Eberhardt, Ruth Y., Deiana, Antonio, Giansanti, Andrea, Finn, Robert D., Bateman, Alex, Punta, Marco
Julkaistu 2013

New mini- zincin structures provide a minimal scaffold for members of this metallopeptidase superfamily

Tekijä Trame, Christine B, Chang, Yuanyuan, Axelrod, Herbert L, Eberhardt, Ruth Y, Coggill, Penelope, Punta, Marco, Rawlings, Neil D
Julkaistu 2014

Filling out the structural map of the NTF2-like superfamily

Tekijä Eberhardt, Ruth Y, Chang, Yuanyuan, Bateman, Alex, Murzin, Alexey G, Axelrod, Herbert L, Hwang, William C, Aravind, L
Julkaistu 2013

Evaluating variants classified as pathogenic in ClinVar in the DDD Study

Tekijä Wright, Caroline F., Eberhardt, Ruth Y., Constantinou, Panayiotis, Hurles, Matthew E., FitzPatrick, David R., Firth, Helen V.
Julkaisussa Genet Med (2020)

Structural genomics analysis of uncharacterized protein families overrepresented in human gut bacteria identifies a novel glycoside hydrolase

Tekijä Sheydina, Anna, Eberhardt, Ruth Y, Rigden, Daniel J, Chang, Yuanyuan, Li, Zhanwen, Zmasek, Christian C, Axelrod, Herbert L, Godzik, Adam
Julkaistu 2014

Rfam 11.0: 10 years of RNA families

Tekijä Burge, Sarah W., Daub, Jennifer, Eberhardt, Ruth, Tate, John, Barquist, Lars, Nawrocki, Eric P., Eddy, Sean R., Gardner, Paul P., Bateman, Alex
Julkaistu 2013

Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila

Tekijä Coggill, Penelope, Eberhardt, Ruth Y, Finn, Robert D, Chang, Yuanyuan, Jaroszewski, Lukasz, Godzik, Adam, Das, Debanu, Xu, Qingping, Axelrod, Herbert L, Aravind, L, Murzin, Alexey G, Bateman, Alex
Julkaistu 2013

Rfam 12.0: updates to the RNA families database

Tekijä Nawrocki, Eric P., Burge, Sarah W., Bateman, Alex, Daub, Jennifer, Eberhardt, Ruth Y., Eddy, Sean R., Floden, Evan W., Gardner, Paul P., Jones, Thomas A., Tate, John, Finn, Robert D.
Julkaisussa Nucleic Acids Res (2014)

Pfam: the protein families database

Tekijä Finn, Robert D., Bateman, Alex, Clements, Jody, Coggill, Penelope, Eberhardt, Ruth Y., Eddy, Sean R., Heger, Andreas, Hetherington, Kirstie, Holm, Liisa, Mistry, Jaina, Sonnhammer, Erik L. L., Tate, John, Punta, Marco
Julkaistu 2014

LUD, a new protein domain associated with lactate utilization

Tekijä Hwang, William C, Bakolitsa, Constantina, Punta, Marco, Coggill, Penelope C, Bateman, Alex, Axelrod, Herbert L, Rawlings, Neil D, Sedova, Mayya, Peterson, Scott N, Eberhardt, Ruth Y, Aravind, L, Pascual, Jaime, Godzik, Adam
Julkaistu 2013

The Pfam protein families database: towards a more sustainable future

Tekijä Finn, Robert D., Coggill, Penelope, Eberhardt, Ruth Y., Eddy, Sean R., Mistry, Jaina, Mitchell, Alex L., Potter, Simon C., Punta, Marco, Qureshi, Matloob, Sangrador-Vegas, Amaia, Salazar, Gustavo A., Tate, John, Bateman, Alex
Julkaisussa Nucleic Acids Res (2016)

Molecular autopsy by trio exome sequencing (ES) and postmortem examination in fetuses and neonates with prenatally identified structural anomalies

Tekijä Quinlan-Jones, Elizabeth, Lord, Jenny, Williams, Denise, Hamilton, Sue, Marton, Tamas, Eberhardt, Ruth Y., Rinck, Gabriele, Prigmore, Elena, Keelagher, Rebecca, McMullan, Dominic J., Maher, Eamonn R., Hurles, Matthew E., Kilby, Mark D.
Julkaisussa Genet Med (2018)

The Pfam protein families database

Tekijä Punta, Marco, Coggill, Penny C., Eberhardt, Ruth Y., Mistry, Jaina, Tate, John, Boursnell, Chris, Pang, Ningze, Forslund, Kristoffer, Ceric, Goran, Clements, Jody, Heger, Andreas, Holm, Liisa, Sonnhammer, Erik L. L., Eddy, Sean R., Bateman, Alex, Finn, Robert D.
Julkaistu 2012

The contribution of X-linked coding variation to severe developmental disorders

Tekijä Martin, Hilary C., Gardner, Eugene J., Samocha, Kaitlin E., Kaplanis, Joanna, Akawi, Nadia, Sifrim, Alejandro, Eberhardt, Ruth Y., Tavares, Ana Lisa Taylor, Neville, Matthew D. C., Niemi, Mari E. K., Gallone, Giuseppe, McRae, Jeremy, Wright, Caroline F., FitzPatrick, David R., Firth, Helen V., Hurles, Matthew E.
Julkaisussa Nat Commun (2021)

Genomic Diagnosis of Rare Pediatric Disease in the United Kingdom and Ireland

Tekijä Wright, Caroline F., Campbell, Patrick, Eberhardt, Ruth Y., Aitken, Stuart, Perrett, Daniel, Brent, Simon, Danecek, Petr, Gardner, Eugene J., Chundru, V. Kartik, Lindsay, Sarah J., Andrews, Katrina, Hampstead, Juliet, Kaplanis, Joanna, Samocha, Kaitlin E., Middleton, Anna, Foreman, Julia, Hobson, Rachel J., Parker, Michael J., Martin, Hilary C., FitzPatrick, David R., Hurles, Matthew E., Firth, Helen V.
Julkaisussa N Engl J Med (2023)