FunPat: function-based pattern analysis on RNA-seq time series data

Por Sanavia, Tiziana, Finotello, Francesca, Di Camillo, Barbara
Publicado no BMC Genomics (2015)

A Boolean Approach to Linear Prediction for Signaling Network Modeling

Por Eduati, Federica, Corradin, Alberto, Di Camillo, Barbara, Toffolo, Gianna
Publicado em 2010

Compression and fast retrieval of SNP data

Por Sambo, Francesco, Di Camillo, Barbara, Toffolo, Gianna, Cobelli, Claudio
Publicado no Bioinformatics (2014)

A rule-based model of insulin signalling pathway

Por Di Camillo, Barbara, Carlon, Azzurra, Eduati, Federica, Toffolo, Gianna Maria
Publicado no BMC Syst Biol (2016)

Bag of Naïve Bayes: biomarker selection and classification from genome-wide SNP data

Por Sambo, Francesco, Trifoglio, Emanuele, Di Camillo, Barbara, Toffolo, Gianna M, Cobelli, Claudio
Publicado em 2012

Significance analysis of microarray transcript levels in time series experiments

Por Di Camillo, Barbara, Toffolo, Gianna, Nair, Sreekumaran K, Greenlund, Laura J, Cobelli, Claudio
Publicado em 2007

Improving biomarker list stability by integration of biological knowledge in the learning process

Por Sanavia, Tiziana, Aiolli, Fabio, Da San Martino, Giovanni, Bisognin, Andrea, Di Camillo, Barbara
Publicado em 2012

Leucine modulates dynamic phosphorylation events in insulin signaling pathway and enhances insulin-dependent glycogen synthesis in human skeletal muscle cells

Por Di Camillo, Barbara, Eduati, Federica, Nair, Sreekumaran K, Avogaro, Angelo, Toffolo, Gianna M
Publicado em 2014

Integrating literature-constrained and data-driven inference of signalling networks

Por Eduati, Federica, De Las Rivas, Javier, Di Camillo, Barbara, Toffolo, Gianna, Saez-Rodriguez, Julio
Publicado em 2012

A quantization method based on threshold optimization for microarray short time series

Por Di Camillo, Barbara, Sanchez-Cabo, Fatima, Toffolo, Gianna, Nair, Sreekumaran K, Trajanoski, Zlatko, Cobelli, Claudio
Publicado em 2005

Function-Based Discovery of Significant Transcriptional Temporal Patterns in Insulin Stimulated Muscle Cells

Por Di Camillo, Barbara, Irving, Brian A., Schimke, Jill, Sanavia, Tiziana, Toffolo, Gianna, Cobelli, Claudio, Nair, K. Sreekumaran
Publicado em 2012

Reducing bias in RNA sequencing data: a novel approach to compute counts

Por Finotello, Francesca, Lavezzo, Enrico, Bianco, Luca, Barzon, Luisa, Mazzon, Paolo, Fontana, Paolo, Toppo, Stefano, Di Camillo, Barbara
Publicado em 2014

Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms

Por Falda Marco, Toppo Stefano, Pescarolo Alessandro, Lavezzo Enrico, Di Camillo Barbara, Facchinetti Andrea, Cilia Elisa, Velasco Riccardo, Fontana Paolo
Publicado em 2012-03-01

The Transcriptional Response in Human Umbilical Vein Endothelial Cells Exposed to Insulin: A Dynamic Gene Expression Approach

Por Di Camillo, Barbara, Sanavia, Tiziana, Iori, Elisabetta, Bronte, Vincenzo, Roncaglia, Enrica, Maran, Alberto, Avogaro, Angelo, Toffolo, Gianna, Cobelli, Claudio
Publicado em 2010

Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms

Por Falda, Marco, Toppo, Stefano, Pescarolo, Alessandro, Lavezzo, Enrico, Di Camillo, Barbara, Facchinetti, Andrea, Cilia, Elisa, Velasco, Riccardo, Fontana, Paolo
Publicado em 2012

Genomic comparative analysis and gene function prediction in infectious diseases: application to the investigation of a meningitis outbreak

Por Lavezzo, Enrico, Toppo, Stefano, Franchin, Elisa, Di Camillo, Barbara, Finotello, Francesca, Falda, Marco, Manganelli, Riccardo, Palù, Giorgio, Barzon, Luisa
Publicado no BMC Infect Dis (2013)

Reconstruction of gene regulatory modules from RNA silencing of IFN-α modulators: experimental set-up and inference method

Por Grassi, Angela, Di Camillo, Barbara, Ciccarese, Francesco, Agnusdei, Valentina, Zanovello, Paola, Amadori, Alberto, Finesso, Lorenzo, Indraccolo, Stefano, Toffolo, Gianna Maria
Publicado no BMC Genomics (2016)

Quantitative modeling of the terminal differentiation of B cells and mechanisms of lymphomagenesis

Por Martínez, María Rodríguez, Corradin, Alberto, Klein, Ulf, Álvarez, Mariano Javier, Toffolo, Gianna M., di Camillo, Barbara, Califano, Andrea, Stolovitzky, Gustavo A.
Publicado em 2012

Effect of Size and Heterogeneity of Samples on Biomarker Discovery: Synthetic and Real Data Assessment

Por Di Camillo, Barbara, Sanavia, Tiziana, Martini, Matteo, Jurman, Giuseppe, Sambo, Francesco, Barla, Annalisa, Squillario, Margherita, Furlanello, Cesare, Toffolo, Gianna, Cobelli, Claudio
Publicado em 2012

Draft Genome Sequences of Two Neisseria meningitidis Serogroup C Clinical Isolates

Por Lavezzo, Enrico, Toppo, Stefano, Barzon, Luisa, Cobelli, Claudio, Di Camillo, Barbara, Finotello, Francesca, Franchin, Elisa, Peruzzo, Denis, Toffolo, Gianna Maria, Trevisan, Marta, Palù, Giorgio
Publicado em 2010