Nascent transcript sequencing visualizes transcription at nucleotide resolution

Por Churchman, L. Stirling, Weissman, Jonathan S.
Publicado em 2011

Genome-wide profiling of RNA polymerase transcription at nucleotide resolution in human cells with native elongating transcript sequencing

Por Mayer, Andreas, Churchman, L. Stirling
Publicado no Nat Protoc (2016)

Mitochondrial Ribosome (Mitoribosome) Profiling for Monitoring Mitochondrial Translation in vivo

Por Couvillion, Mary T., Churchman, L. Stirling
Publicado no Curr Protoc Mol Biol (2017)

A detailed protocol for subcellular RNA sequencing (subRNA-seq)

Por Mayer, Andreas, Churchman, L. Stirling
Publicado no Curr Protoc Mol Biol (2017)

Single-Molecule High-Resolution Colocalization of Single Probes

Por Churchman, L. Stirling, Spudich, James A.
Publicado no Cold Spring Harb Protoc (2012)

Colocalization of Fluorescent Probes: Accurate and Precise Registration with Nanometer Resolution

Por Churchman, L. Stirling, Spudich, James A.
Publicado no Cold Spring Harb Protoc (2012)

Subgenic Pol II interactomes identify region‐specific transcription elongation regulators

Por Harlen, Kevin M, Churchman, L Stirling
Publicado no Mol Syst Biol (2017)

A Non-Gaussian Distribution Quantifies Distances Measured with Fluorescence Localization Techniques

Por Churchman, L. Stirling, Flyvbjerg, Henrik, Spudich, James A.
Publicado em 2006

Pause & Go: from the discovery of RNA polymerase pausing to its functional implications

Por Mayer, Andreas, Landry, Heather M., Churchman, L. Stirling
Publicado no Curr Opin Cell Biol (2017)

The ground state and evolution of promoter region directionality

Por Jin, Yi, Eser, Umut, Struhl, Kevin, Churchman, L. Stirling
Publicado no Cell (2017)

Synchronized translation programs across compartments during mitochondrial biogenesis

Por Couvillion, Mary T., Soto, Iliana C., Shipkovenska, Gergana, Churchman, L. Stirling
Publicado no Nature (2016)

Optimized localization-analysis for single-molecule tracking and super-resolution microscopy

Por Mortensen, Kim I., Churchman, L. Stirling, Spudich, James A., Flyvbjerg, Henrik
Publicado em 2010

H3K4 Trimethylation by Set1 Promotes Efficient Termination by the Nrd1-Nab3-Sen1 Pathway

Por Terzi, Nihal, Churchman, L. Stirling, Vasiljeva, Lidia, Weissman, Jonathan, Buratowski, Stephen
Publicado em 2011

Single molecule high-resolution colocalization of Cy3 and Cy5 attached to macromolecules measures intramolecular distances through time

Por Churchman, L. Stirling, Ökten, Zeynep, Rock, Ronald S., Dawson, John F., Spudich, James A.
Publicado em 2005

Total RNA-seq to identify pharmacological effects on specific stages of mRNA synthesis

Por Boswell, Sarah A, Snavely, Andrew, Landry, Heather M, Churchman, L Stirling, Gray, Jesse M, Springer, Michael
Publicado no Nat Chem Biol (2017)

Comprehensive RNA Polymerase II Interactomes Reveal Distinct and Varied Roles for Each Phospho-CTD Residue

Por Harlen, Kevin M., Trotta, Kristine L., Smith, Erin E., Mosaheb, Mohammad M., Fuchs, Stephen M., Churchman, L. Stirling
Publicado no Cell Rep (2016)

Cell-Cycle Modulation of Transcription Termination Factor Sen1

Por Mischo, Hannah E., Chun, Yujin, Harlen, Kevin M., Smalec, Brendan M., Dhir, Somdutta, Churchman, L. Stirling, Buratowski, Stephen
Publicado no Mol Cell (2018)

Native Elongating Transcript Sequencing Reveals Human Transcriptional Activity at Nucleotide Resolution

Por Mayer, Andreas, Iulio, Julia di, Maleri, Seth, Eser, Umut, Vierstra, Jeff, Reynolds, Alex, Sandstrom, Richard, Stamatoyannopoulos, John A., Churchman, L. Stirling
Publicado no Cell (2015)

Rapid Creation and Quantitative Monitoring of High Coverage shRNA Libraries

Por Bassik, Michael C., Lebbink, Robert Jan, Churchman, L. Stirling, Ingolia, Nicholas T., Patena, Weronika, LeProust, Emily M., Schuldiner, Maya, Weissman, Jonathan S., McManus, Michael T.
Publicado em 2009

Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms

Por Padovan-Merhar, Olivia, Nair, Gautham P., Biaesch, Andrew, Mayer, Andreas, Scarfone, Steven, Foley, Shawn W., Wu, Angela R., Churchman, L. Stirling, Singh, Abhyudai, Raj, Arjun
Publicado no Mol Cell (2015)