Intra-tracheal Administration of Haemophilus influenzae in Mouse Models to Study Airway Inflammation

Bằng Venuprasad, K., Theivanthiran, Balamayooran, Cantarel, Brandi
Xuất bản năm J Vis Exp (2016)

Complex Carbohydrate Utilization by the Healthy Human Microbiome

Bằng Cantarel, Brandi L., Lombard, Vincent, Henrissat, Bernard
Được phát hành 2012

Sparse distance-based learning for simultaneous multiclass classification and feature selection of metagenomic data

Bằng Liu, Zhenqiu, Hsiao, William, Cantarel, Brandi L., Drábek, Elliott Franco, Fraser-Liggett, Claire
Được phát hành 2011

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

Bằng Cantarel, Brandi L., Coutinho, Pedro M., Rancurel, Corinne, Bernard, Thomas, Lombard, Vincent, Henrissat, Bernard
Được phát hành 2009

BAYSIC: a Bayesian method for combining sets of genome variants with improved specificity and sensitivity

Bằng Cantarel, Brandi L, Weaver, Daniel, McNeill, Nathan, Zhang, Jianhua, Mackey, Aaron J, Reese, Justin
Được phát hành 2014

Gene-targeted metagenomic analysis of glucan-branching enzyme gene profiles among human and animal fecal microbiota

Bằng Lee, Sunghee, Cantarel, Brandi, Henrissat, Bernard, Gevers, Dirk, Birren, Bruce W, Huttenhower, Curtis, Ko, GwangPyo
Được phát hành 2014

Functionally pathogenic EARS2 variants in vitro may not manifest a phenotype in vivo

Bằng McNeill, Nathan, Nasca, Alessia, Reyes, Aurelio, Lemoine, Benjamin, Cantarel, Brandi, Vanderver, Adeline, Schiffmann, Raphael, Ghezzi, Daniele
Xuất bản năm Neurol Genet (2017)

The convergence of carbohydrate active gene repertoires in human gut microbes

Bằng Lozupone, Catherine A., Hamady, Micah, Cantarel, Brandi L., Coutinho, Pedro M., Henrissat, Bernard, Gordon, Jeffrey I., Knight, Rob
Được phát hành 2008

Analysis of archived residual newborn screening blood spots after whole genome amplification

Bằng Cantarel, Brandi L., Lei, Yunping, Weaver, Daniel, Zhu, Huiping, Farrell, Andrew, Benstead-Hume, Graeme, Reese, Justin, Finnell, Richard H.
Xuất bản năm BMC Genomics (2015)

MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes

Bằng Cantarel, Brandi L., Korf, Ian, Robb, Sofia M.C., Parra, Genis, Ross, Eric, Moore, Barry, Holt, Carson, Sánchez Alvarado, Alejandro, Yandell, Mark
Được phát hành 2008

Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations

Bằng Looft, Torey, Allen, Heather K, Cantarel, Brandi L, Levine, Uri Y, Bayles, Darrell O, Alt, David P, Henrissat, Bernard, Stanton, Thaddeus B
Xuất bản năm ISME J (2014)

Gut microbiota in MS: possible influence of immunomodulators

Bằng Cantarel, Brandi L., Waubant, Emmanuelle, Chehoud, Christel, Kuczynski, Justin, DeSantis, Todd Z., Warrington, Janet, Venkatesan, Arun, Fraser, Claire M., Mowry, Ellen M.
Xuất bản năm J Investig Med (2015)

Metaproteomics reveals persistent and phylum-redundant metabolic functional stability in adult human gut microbiomes of Crohn’s remission patients despite temporal variations in mi...

Bằng Blakeley-Ruiz, J. Alfredo, Erickson, Alison R., Cantarel, Brandi L., Xiong, Weili, Adams, Rachel, Jansson, Janet K., Fraser, Claire M., Hettich, Robert L.
Xuất bản năm Microbiome (2019)

Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes

Bằng Tasse, Lena, Bercovici, Juliette, Pizzut-Serin, Sandra, Robe, Patrick, Tap, Julien, Klopp, Christophe, Cantarel, Brandi L., Coutinho, Pedro M., Henrissat, Bernard, Leclerc, Marion, Doré, Joël, Monsan, Pierre, Remaud-Simeon, Magali, Potocki-Veronese, Gabrielle
Được phát hành 2010

Strategies for Metagenomic-Guided Whole-Community Proteomics of Complex Microbial Environments

Bằng Cantarel, Brandi L., Erickson, Alison R., VerBerkmoes, Nathan C., Erickson, Brian K., Carey, Patricia A., Pan, Chongle, Shah, Manesh, Mongodin, Emmanuel F., Jansson, Janet K., Fraser-Liggett, Claire M., Hettich, Robert L.
Được phát hành 2011

Whole-Genome Sequencing Accurately Identifies Resistance to Extended-Spectrum β-Lactams for Major Gram-Negative Bacterial Pathogens

Bằng Shelburne, Samuel A, Kim, Jiwoong, Munita, Jose M, Sahasrabhojane, Pranoti, Shields, Ryan K, Press, Ellen G, Li, Xiqi, Arias, Cesar A, Cantarel, Brandi, Jiang, Ying, Kim, Min S, Aitken, Samuel L, Greenberg, David E
Xuất bản năm Clin Infect Dis (2017)

Integrated Metagenomics/Metaproteomics Reveals Human Host-Microbiota Signatures of Crohn's Disease

Bằng Erickson, Alison R., Cantarel, Brandi L., Lamendella, Regina, Darzi, Youssef, Mongodin, Emmanuel F., Pan, Chongle, Shah, Manesh, Halfvarson, Jonas, Tysk, Curt, Henrissat, Bernard, Raes, Jeroen, Verberkmoes, Nathan C., Fraser, Claire M., Hettich, Robert L., Jansson, Janet K.
Được phát hành 2012

GEAMP, a Novel Gastroesophageal Junction Carcinoma Cell Line Derived from a Malignant Pleural Effusion

Bằng Zhang, Wei, Williams, Taylor A., Bhagwath, Ankur S., Hiermann, Jared S., Peacock, Craig D., Watkins, D. Neil, Ding, Peiguo, Park, Jason Y., Montgomery, Elizabeth A., Forastiere, Arlene A., Jie, Chunfa, Cantarel, Brandi L., Pham, Thai H., Wang, David H.
Xuất bản năm Lab Invest (2019)

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

Bằng Abubucker, Sahar, Segata, Nicola, Goll, Johannes, Schubert, Alyxandria M., Izard, Jacques, Cantarel, Brandi L., Rodriguez-Mueller, Beltran, Zucker, Jeremy, Thiagarajan, Mathangi, Henrissat, Bernard, White, Owen, Kelley, Scott T., Methé, Barbara, Schloss, Patrick D., Gevers, Dirk, Mitreva, Makedonka, Huttenhower, Curtis
Được phát hành 2012

Mitochondrial dysfunction during loss of prohibitin 1 triggers Paneth cell defects and ileitis

Bằng Jackson, Dakota N, Panopoulos, Marina, Neumann, William L, Turner, Kevin, Cantarel, Brandi L, Thompson-Snipes, LuAnn, Dassopoulos, Themistocles, Feagins, Linda A, Souza, Rhonda F, Mills, Jason C, Blumberg, Richard S, Venuprasad, K, Thompson, Winston E, Theiss, Arianne L
Xuất bản năm Gut (2020)