Individual cells can resolve variations in stimulus intensity along the IGF-PI3K-AKT signaling axis

od Gross, Sean M., Dane, Mark A., Bucher, Elmar, Heiser, Laura M.
Izdano u Cell Syst (2019)

Annot: a Django-based sample, reagent, and experiment metadata tracking system

od Bucher, Elmar, Claunch, Cheryl J., Hee, Derrick, Smith, Rebecca L., Devlin, Kaylyn, Thompson, Wallace, Korkola, James E., Heiser, Laura M.
Izdano u BMC Bioinformatics (2019)

PATH-63. TRANSCRIPTIONAL SIGNATURES IN HISTOLOGIC STRUCTURES WITHIN GLIOBLASTOMA TUMORS MAY PREDICT PERSONALIZED TREATMENT SENSITIVITY AND SURVIVAL

od Kersch, Cymon, Claunch, Cheryl, Ambady, Prakash, Bucher, Elmar, Schwartz, Daniel, Barajas, Ramon, Iliff, Jeffrey, Heiser, Laura, Muldoon, Leslie, Neuwelt, Edward
Izdano u Neuro Oncol (2019)

Using microarrays to interrogate microenvironmental impact on cellular phenotypes in cancer.

od Smith, Rebecca, Devlin, Kaylyn, Kilburn, David, Gross, Sean, Sudar, Damir, Bucher, Elmar, Nederlof, Michel, Dane, Mark, Gray, Joe W, Heiser, Laura, Korkola, James E
Izdano u J Vis Exp (2019)

Enzalutamide response in a panel of prostate cancer cell lines reveals a role for glucocorticoid receptor in enzalutamide resistant disease

od Smith, Rebecca, Liu, Moqing, Liby, Tiera, Bayani, Nora, Bucher, Elmar, Chiotti, Kami, Derrick, Daniel, Chauchereau, Anne, Heiser, Laura, Alumkal, Joshi, Feiler, Heidi, Carroll, Peter, Korkola, James E.
Izdano u Sci Rep (2020)

Metabolomics of human breast cancer: new approaches for tumor typing and biomarker discovery

od Denkert, Carsten, Bucher, Elmar, Hilvo, Mika, Salek, Reza, Orešič, Matej, Griffin, Julian, Brockmöller, Scarlet, Klauschen, Frederick, Loibl, Sibylle, Barupal, Dinesh Kumar, Budczies, Jan, Iljin, Kristiina, Nekljudova, Valentina, Fiehn, Oliver
Izdano 2012

Correction: GTI: A Novel Algorithm for Identifying Outlier Gene Expression Profiles from Integrated Microarray Datasets

od Mpindi, John Patrick, Sara, Henri, Haapa-Paananen, Saija, Kilpinen, Sami, Pisto, Tommi, Bucher, Elmar, Ojala, Kalle, Iljin, Kristiina, Vainio, Paula, Björkman, Mari, Gupta, Santosh, Kohonen, Pekka, Nees, Matthias, Kallioniemi, Olli
Izdano 2011

GTI: A Novel Algorithm for Identifying Outlier Gene Expression Profiles from Integrated Microarray Datasets

od Mpindi, John Patrick, Sara, Henri, Haapa-Paananen, Saija, Kilpinen, Sami, Pisto, Tommi, Bucher, Elmar, Ojala, Kalle, Iljin, Kristiina, Vainio, Paula, Björkman, Mari, Gupta, Santosh, Kohonen, Pekka, Nees, Matthias, Kallioniemi, Olli
Izdano 2011

Mutant p53–associated myosin-X upregulation promotes breast cancer invasion and metastasis

od Arjonen, Antti, Kaukonen, Riina, Mattila, Elina, Rouhi, Pegah, Högnäs, Gunilla, Sihto, Harri, Miller, Bryan W., Morton, Jennifer P., Bucher, Elmar, Taimen, Pekka, Virtakoivu, Reetta, Cao, Yihai, Sansom, Owen J., Joensuu, Heikki, Ivaska, Johanna
Izdano 2014

Transcriptional signatures in histologic structures within glioblastoma tumors may predict personalized drug sensitivity and survival

od Kersch, Cymon N, Claunch, Cheryl J, Ambady, Prakash, Bucher, Elmar, Schwartz, Daniel L, Barajas, Ramon F, Iliff, Jeffrey J, Risom, Tyler, Heiser, Laura, Muldoon, Leslie L, Korkola, James E, Gray, Joe W, Neuwelt, Edward A
Izdano u Neurooncol Adv (2020)

Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues

od Kilpinen, Sami, Autio, Reija, Ojala, Kalle, Iljin, Kristiina, Bucher, Elmar, Sara, Henri, Pisto, Tommi, Saarela, Matti, Skotheim, Rolf I, Björkman, Mari, Mpindi, John-Patrick, Haapa-Paananen, Saija, Vainio, Paula, Edgren, Henrik, Wolf, Maija, Astola, Jaakko, Nees, Matthias, Hautaniemi, Sampsa, Kallioniemi, Olli
Izdano 2008

Microenvironment-Mediated Mechanisms of Resistance to HER2 Inhibitors Differ between HER2+ Breast Cancer Subtypes

od Watson, Spencer S., Dane, Mark, Chin, Koei, Tatarova, Zuzana, Liu, Moqing, Liby, Tiera, Thompson, Wallace, Smith, Rebecca, Nederlof, Michel, Bucher, Elmar, Kilburn, David, Whitman, Matthew, Sudar, Damir, Mills, Gordon B., Heiser, Laura M., Jonas, Oliver, Gray, Joe W., Korkola, James E.
Izdano u Cell Syst (2018)

The impact of tumor epithelial and microenvironmental heterogeneity on treatment responses in HER2(+) breast cancer

od Janiszewska, Michalina, Stein, Shayna, Metzger Filho, Otto, Eng, Jennifer, Kingston, Natalie L., Harper, Nicholas W., Rye, Inga H., Alečković, Maša, Trinh, Anne, Murphy, Katherine C., Marangoni, Elisabetta, Cristea, Simona, Oakes, Benjamin, Winer, Eric P., Krop, Ian E., Russnes, Hege G., Spellman, Paul T., Bucher, Elmar, Hu, Zhi, Chin, Koei, Gray, Joe W., Michor, Franziska, Polyak, Kornelia
Izdano u JCI Insight (2021)

The Library of Integrated Network-based Cellular Signatures (LINCS) NIH Program: System-level Cataloging of Human Cells Response to Perturbations

od Keenan, Alexandra B., Jenkins, Sherry L., Jagodnik, Kathleen M., Koplev, Simon, He, Edward, Torre, Denis, Wang, Zichen, Dohlman, Anders B., Silverstein, Moshe C., Lachmann, Alexander, Kuleshov, Maxim V., Ma’ayan, Avi, Stathias, Vasileios, Terryn, Raymond, Cooper, Daniel, Forlin, Michele, Koleti, Amar, Vidovic, Dusica, Chung, Caty, Schürer, Stephan C., Vasiliauskas, Jouzas, Pilarczyk, Marcin, Shamsaei, Behrouz, Fazel, Mehdi, Ren, Yan, Niu, Wen, Clark, Nicholas A., White, Shana, Mahi, Naim, Zhang, Lixia, Kouril, Michal, Reichard, John F., Sivaganesan, Siva, Medvedovic, Mario, Meller, Jaroslaw, Koch, Rick J., Birtwistle, Marc R., Iyengar, Ravi, Sobie, Eric A., Azeloglu, Evren, Kaye, Julia, Osterloh, Jeannette, Haston, Kelly, Kalra, Jaslin, Finkbiener, Steve M., Li, Jonathan, Milani, Pamela, Adam, Miriam, Escalante, Renan, Sachs, Karen, Lenail, Alex, Ramamoorthy, Divya, Fraenkel, Ernest, Daigle, Gavin, Hussain, Uzma, Coye, Alyssa, Rothstein, Jeffrey, Sareen, Dhruv, Ornelas, Loren, Banuelos, Maria, Mandefro, Berhan, Ho, Ritchie, Svendsen, Clive N., Lim, Ryan, Stocksdale, Jennifer, Casale, Malcolm, Thompson, Terri, Wu, Jenny, Thompson, Leslie M., Dardov, Victoria, Venkatraman, Vidya, Matlock, Andrea, Van Eyk, Jenny, Jaffe, Jacob D., Papanastasiou, Malvina, Subramanian, Aravind, Golub, Todd R., Erickson, Sean D., Fallahi-Sichani, Mohammad, Hafner, Marc, Gray, Nathanael S., Lin, Jia-Ren, Mills, Caitlin E., Muhlich, Jeremy L., Niepel, Mario, Shamu, Caroline E., Williams, Elizabeth H., Wrobel, David, Sorger, Peter K., Heiser, Laura M., Gray, Joe W., Korkola, James E., Mills, Gordon B., LaBarge, Mark, Feiler, Heidi S., Dane, Mark A., Bucher, Elmar, Nederlof, Michel, Sudar, Damir, Gross, Sean, Kilburn, David F., Smith, Rebecca, Devlin, Kaylyn, Margolis, Ron, Derr, Leslie, Lee, Albert, Pilai, Ajay
Izdano u Cell Syst (2017)