A Potentially Functional Mariner Transposable Element in the Protist Trichomonas vaginalis

por Silva, Joana C., Bastida, Felix, Bidwell, Shelby L., Johnson, Patricia J., Carlton, Jane M.
Publicado 2004

Reassociation kinetics-based approach for partial genome sequencing of the cattle tick, Rhipicephalus (Boophilus) microplus

por Guerrero, Felix D, Moolhuijzen, Paula, Peterson, Daniel G, Bidwell, Shelby, Caler, Elisabet, Bellgard, Matthew, Nene, Vishvanath M, Djikeng, Appolinaire
Publicado 2010

A Plasmodium Whole-Genome Synteny Map: Indels and Synteny Breakpoints as Foci for Species-Specific Genes

por Kooij, Taco W. A, Carlton, Jane M, Bidwell, Shelby L, Hall, Neil, Ramesar, Jai, Janse, Chris J, Waters, Andrew P
Publicado 2005

An improved genome release (version Mt4.0) for the model legume Medicago truncatula

por Tang, Haibao, Krishnakumar, Vivek, Bidwell, Shelby, Rosen, Benjamin, Chan, Agnes, Zhou, Shiguo, Gentzbittel, Laurent, Childs, Kevin L, Yandell, Mark, Gundlach, Heidrun, Mayer, Klaus FX, Schwartz, David C, Town, Christopher D
Publicado en BMC Genomics (2014)

Hidden genomic evolution in a morphospecies—The landscape of rapidly evolving genes in Tetrahymena

por Xiong, Jie, Yang, Wentao, Chen, Kai, Jiang, Chuanqi, Ma, Yang, Chai, Xiaocui, Yan, Guanxiong, Wang, Guangying, Yuan, Dongxia, Liu, Yifan, Bidwell, Shelby L., Zafar, Nikhat, Hadjithomas, Michalis, Krishnakumar, Vivek, Coyne, Robert S., Orias, Eduardo, Miao, Wei
Publicado en PLoS Biol (2019)

Protein Interaction Data Curation - The International Molecular Exchange Consortium (IMEx)

por Orchard, Sandra, Kerrien, Samuel, Abbani, Sara, Aranda, Bruno, Bhate, Jignesh, Bidwell, Shelby, Bridge, Alan, Briganti, Leonardo, Brinkman, Fiona S. L., Cesareni, Gianni, Chatr-aryamontri, Andrew, Chautard, Emilie, Chen, Carol, Dumousseau, Marine, Goll, Johannes, Hancock, Robert E. W., Hannick, Linda I., Jurisica, Igor, Khadake, Jyoti, Lynn, David J., Mahadevan, Usha, Perfetto, Livia, Raghunath, Arathi, Ricard-Blum, Sylvie, Roechert, Bernd, Salwinski, Lukasz, Stümpflen, Volker, Tyers, Mike, Uetz, Peter, Xenarios, Ioannis, Hermjakob, Henning
Publicado 2012

Genome Sequence of Babesia bovis and Comparative Analysis of Apicomplexan Hemoprotozoa

por Brayton, Kelly A, Lau, Audrey O. T, Herndon, David R, Hannick, Linda, Kappmeyer, Lowell S, Berens, Shawn J, Bidwell, Shelby L, Brown, Wendy C, Crabtree, Jonathan, Fadrosh, Doug, Feldblum, Tamara, Forberger, Heather A, Haas, Brian J, Howell, Jeanne M, Khouri, Hoda, Koo, Hean, Mann, David J, Norimine, Junzo, Paulsen, Ian T, Radune, Diana, Ren, Qinghu, Smith, Roger K, Suarez, Carlos E, White, Owen, Wortman, Jennifer R, Knowles, Donald P, McElwain, Terry F, Nene, Vishvanath M
Publicado 2007

Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

por Parkin, Isobel AP, Koh, Chushin, Tang, Haibao, Robinson, Stephen J, Kagale, Sateesh, Clarke, Wayne E, Town, Chris D, Nixon, John, Krishnakumar, Vivek, Bidwell, Shelby L, Denoeud, France, Belcram, Harry, Links, Matthew G, Just, Jérémy, Clarke, Carling, Bender, Tricia, Huebert, Terry, Mason, Annaliese S, Pires, J Chris, Barker, Guy, Moore, Jonathan, Walley, Peter G, Manoli, Sahana, Batley, Jacqueline, Edwards, David, Nelson, Matthew N, Wang, Xiyin, Paterson, Andrew H, King, Graham, Bancroft, Ian, Chalhoub, Boulos, Sharpe, Andrew G
Publicado 2014

Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome

por Hamilton, Eileen P, Kapusta, Aurélie, Huvos, Piroska E, Bidwell, Shelby L, Zafar, Nikhat, Tang, Haibao, Hadjithomas, Michalis, Krishnakumar, Vivek, Badger, Jonathan H, Caler, Elisabet V, Russ, Carsten, Zeng, Qiandong, Fan, Lin, Levin, Joshua Z, Shea, Terrance, Young, Sarah K, Hegarty, Ryan, Daza, Riza, Gujja, Sharvari, Wortman, Jennifer R, Birren, Bruce W, Nusbaum, Chad, Thomas, Jainy, Carey, Clayton M, Pritham, Ellen J, Feschotte, Cédric, Noto, Tomoko, Mochizuki, Kazufumi, Papazyan, Romeo, Taverna, Sean D, Dear, Paul H, Cassidy-Hanley, Donna M, Xiong, Jie, Miao, Wei, Orias, Eduardo, Coyne, Robert S
Publicado en eLife (2016)

Comparative genomics of the neglected human malaria parasite Plasmodium vivax

por Carlton, Jane M., Adams, John H., Silva, Joana C., Bidwell, Shelby L., Lorenzi, Hernan, Caler, Elisabet, Crabtree, Jonathan, Angiuoli, Samuel V., Merino, Emilio F., Amedeo, Paolo, Cheng, Qin, Coulson, Richard M. R., Crabb, Brendan S., del Portillo, Hernando A., Essien, Kobby, Feldblyum, Tamara V., Fernandez-Becerra, Carmen, Gilson, Paul R., Gueye, Amy H., Guo, Xiang, Kang’a, Simon, Kooij, Taco W. A., Korsinczky, Michael, Meyer, Esmeralda V.-S., Nene, Vish, Paulsen, Ian, White, Owen, Ralph, Stuart A., Ren, Qinghu, Sargeant, Tobias J., Salzberg, Steven L., Stoeckert, Christian J., Sullivan, Steven A., Yamamoto, Marcio Massao, Hoffman, Stephen L., Wortman, Jennifer R., Gardner, Malcolm J., Galinski, Mary R., Barnwell, John W., Fraser-Liggett, Claire M.
Publicado 2008

Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis

por Carlton, Jane M., Hirt, Robert P., Silva, Joana C., Delcher, Arthur L., Schatz, Michael, Zhao, Qi, Wortman, Jennifer R., Bidwell, Shelby L., Alsmark, U. Cecilia M., Besteiro, Sébastien, Sicheritz-Ponten, Thomas, Noel, Christophe J., Dacks, Joel B., Foster, Peter G., Simillion, Cedric, Van de Peer, Yves, Miranda-Saavedra, Diego, Barton, Geoffrey J., Westrop, Gareth D., Müller, Sylke, Dessi, Daniele, Fiori, Pier Luigi, Ren, Qinghu, Paulsen, Ian, Zhang, Hanbang, Bastida-Corcuera, Felix D., Simoes-Barbosa, Augusto, Brown, Mark T., Hayes, Richard D., Mukherjee, Mandira, Okumura, Cheryl Y., Schneider, Rachel, Smith, Alias J., Vanacova, Stepanka, Villalvazo, Maria, Haas, Brian J., Pertea, Mihaela, Feldblyum, Tamara V., Utterback, Terry R., Shu, Chung-Li, Osoegawa, Kazutoyo, de Jong, Pieter J., Hrdy, Ivan, Horvathova, Lenka, Zubacova, Zuzana, Dolezal, Pavel, Malik, Shehre-Banoo, Logsdon, John M., Henze, Katrin, Gupta, Arti, Wang, Ching C., Dunne, Rebecca L., Upcroft, Jacqueline A., Upcroft, Peter, White, Owen, Salzberg, Steven L., Tang, Petrus, Chiu, Cheng-Hsun, Lee, Ying-Shiung, Embley, T. Martin, Coombs, Graham H., Mottram, Jeremy C., Tachezy, Jan, Fraser-Liggett, Claire M., Johnson, Patricia J.
Publicado 2007

Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics

por Arensburger, Peter, Megy, Karine, Waterhouse, Robert M., Abrudan, Jenica, Amedeo, Paolo, Antelo, Beatriz, Bartholomay, Lyric, Bidwell, Shelby, Caler, Elisabet, Camara, Francisco, Campbell, Corey L., Campbell, Kathryn S., Casola, Claudio, Castro, Marta T., Chandramouliswaran, Ishwar, Chapman, Sinéad B., Christley, Scott, Costas, Javier, Eisenstadt, Eric, Feshotte, Cedric, Fraser-Liggett, Claire, Guigo, Roderic, Haas, Brian, Hammond, Martin, Hansson, Bill S., Hemingway, Janet, Hill, Sharon, Howarth, Clint, Ignell, Rickard, Kennedy, Ryan C., Kodira, Chinnappa D., Lobo, Neil F., Mao, Chunhong, Mayhew, George, Michel, Kristin, Mori, Akio, Liu, Nannan, Naveira, Horacio, Nene, Vishvanath, Nguyen, Nam, Pearson, Matthew D., Pritham, Ellen J., Puiu, Daniela, Qi, Yumin, Ranson, Hilary, Ribeiro, Jose M. C., Roberston, Hugh M., Severson, David W., Shumway, Martin, Stanke, Mario, Strausberg, Robert, Sun, Cheng, Sutton, Granger, Tu, Zhijian (Jake), Tubio, Jose Manuel C., Unger, Maria F., Vanlandingham, Dana L., Vilella, Albert J., White, Owen, White, Jared R., Wondji, Charles S., Wortman, Jennifer, Zdobnov, Evgeny M., Birren, Bruce, Christensen, Bruce M., Collins, Frank H., Cornel, Anthony, Dimopoulos, George, Hannick, Linda I., Higgs, Stephen, Lanzaro, Gregory C., Lawson, Daniel, Lee, Norman H., Muskavitch, Marc A. T., Raikhel, Alexander S., Atkinson, Peter W.
Publicado 2010

Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle

por Kirkness, Ewen F., Haas, Brian J., Sun, Weilin, Braig, Henk R., Perotti, M. Alejandra, Clark, John M., Lee, Si Hyeock, Robertson, Hugh M., Kennedy, Ryan C., Elhaik, Eran, Gerlach, Daniel, Kriventseva, Evgenia V., Elsik, Christine G., Graur, Dan, Hill, Catherine A., Veenstra, Jan A., Walenz, Brian, Tubío, José Manuel C., Ribeiro, José M. C., Rozas, Julio, Johnston, J. Spencer, Reese, Justin T., Popadic, Aleksandar, Tojo, Marta, Raoult, Didier, Reed, David L., Tomoyasu, Yoshinori, Kraus, Emily, Mittapalli, Omprakash, Margam, Venu M., Li, Hong-Mei, Meyer, Jason M., Johnson, Reed M., Romero-Severson, Jeanne, VanZee, Janice Pagel, Alvarez-Ponce, David, Vieira, Filipe G., Aguadé, Montserrat, Guirao-Rico, Sara, Anzola, Juan M., Yoon, Kyong S., Strycharz, Joseph P., Unger, Maria F., Christley, Scott, Lobo, Neil F., Seufferheld, Manfredo J., Wang, NaiKuan, Dasch, Gregory A., Struchiner, Claudio J., Madey, Greg, Hannick, Linda I., Bidwell, Shelby, Joardar, Vinita, Caler, Elisabet, Shao, Renfu, Barker, Stephen C., Cameron, Stephen, Bruggner, Robert V., Regier, Allison, Johnson, Justin, Viswanathan, Lakshmi, Utterback, Terry R., Sutton, Granger G., Lawson, Daniel, Waterhouse, Robert M., Venter, J. Craig, Strausberg, Robert L., Berenbaum, May R., Collins, Frank H., Zdobnov, Evgeny M., Pittendrigh, Barry R.
Publicado 2010

Genomic insights into the Ixodes scapularis tick vector of Lyme disease

por Gulia-Nuss, Monika, Nuss, Andrew B., Meyer, Jason M., Sonenshine, Daniel E., Roe, R. Michael, Waterhouse, Robert M., Sattelle, David B., de la Fuente, José, Ribeiro, Jose M., Megy, Karine, Thimmapuram, Jyothi, Miller, Jason R., Walenz, Brian P., Koren, Sergey, Hostetler, Jessica B., Thiagarajan, Mathangi, Joardar, Vinita S., Hannick, Linda I., Bidwell, Shelby, Hammond, Martin P., Young, Sarah, Zeng, Qiandong, Abrudan, Jenica L., Almeida, Francisca C., Ayllón, Nieves, Bhide, Ketaki, Bissinger, Brooke W., Bonzon-Kulichenko, Elena, Buckingham, Steven D., Caffrey, Daniel R., Caimano, Melissa J., Croset, Vincent, Driscoll, Timothy, Gilbert, Don, Gillespie, Joseph J., Giraldo-Calderón, Gloria I., Grabowski, Jeffrey M., Jiang, David, Khalil, Sayed M. S., Kim, Donghun, Kocan, Katherine M., Koči, Juraj, Kuhn, Richard J., Kurtti, Timothy J., Lees, Kristin, Lang, Emma G., Kennedy, Ryan C., Kwon, Hyeogsun, Perera, Rushika, Qi, Yumin, Radolf, Justin D., Sakamoto, Joyce M., Sánchez-Gracia, Alejandro, Severo, Maiara S., Silverman, Neal, Šimo, Ladislav, Tojo, Marta, Tornador, Cristian, Van Zee, Janice P., Vázquez, Jesús, Vieira, Filipe G., Villar, Margarita, Wespiser, Adam R., Yang, Yunlong, Zhu, Jiwei, Arensburger, Peter, Pietrantonio, Patricia V., Barker, Stephen C., Shao, Renfu, Zdobnov, Evgeny M., Hauser, Frank, Grimmelikhuijzen, Cornelis J. P., Park, Yoonseong, Rozas, Julio, Benton, Richard, Pedra, Joao H. F., Nelson, David R., Unger, Maria F., Tubio, Jose M. C., Tu, Zhijian, Robertson, Hugh M., Shumway, Martin, Sutton, Granger, Wortman, Jennifer R., Lawson, Daniel, Wikel, Stephen K., Nene, Vishvanath M., Fraser, Claire M., Collins, Frank H., Birren, Bruce, Nelson, Karen E., Caler, Elisabet, Hill, Catherine A.
Publicado en Nat Commun (2016)

The Medicago Genome Provides Insight into the Evolution of Rhizobial Symbioses

por Young, Nevin D., Debellé, Frédéric, Oldroyd, Giles E. D., Geurts, Rene, Cannon, Steven B., Udvardi, Michael K., Benedito, Vagner A., Mayer, Klaus F. X., Gouzy, Jérôme, Schoof, Heiko, Van de Peer, Yves, Proost, Sebastian, Cook, Douglas R., Meyers, Blake C., Spannagl, Manuel, Cheung, Foo, De Mita, Stéphane, Krishnakumar, Vivek, Gundlach, Heidrun, Zhou, Shiguo, Mudge, Joann, Bharti, Arvind K., Murray, Jeremy D., Naoumkina, Marina A., Rosen, Benjamin, Silverstein, Kevin A. T., Tang, Haibao, Rombauts, Stephane, Zhao, Patrick X., Zhou, Peng, Barbe, Valérie, Bardou, Philippe, Bechner, Michael, Bellec, Arnaud, Berger, Anne, Bergès, Hélène, Bidwell, Shelby, Bisseling, Ton, Choisne, Nathalie, Couloux, Arnaud, Denny, Roxanne, Deshpande, Shweta, Dai, Xinbin, Doyle, Jeff, Dudez, Anne-Marie, Farmer, Andrew D., Fouteau, Stéphanie, Franken, Carolien, Gibelin, Chrystel, Gish, John, Goldstein, Steven, González, Alvaro J., Green, Pamela J., Hallab, Asis, Hartog, Marijke, Hua, Axin, Humphray, Sean, Jeong, Dong-Hoon, Jing, Yi, Jöcker, Anika, Kenton, Steve M., Kim, Dong-Jin, Klee, Kathrin, Lai, Hongshing, Lang, Chunting, Lin, Shaoping, Macmil, Simone L, Magdelenat, Ghislaine, Matthews, Lucy, McCorrison, Jamison, Monaghan, Erin L., Mun, Jeong-Hwan, Najar, Fares Z., Nicholson, Christine, Noirot, Céline, O’Bleness, Majesta, Paule, Charles R., Poulain, Julie, Prion, Florent, Qin, Baifang, Qu, Chunmei, Retzel, Ernest F., Riddle, Claire, Sallet, Erika, Samain, Sylvie, Samson, Nicolas, Sanders, Iryna, Saurat, Olivier, Scarpelli, Claude, Schiex, Thomas, Segurens, Béatrice, Severin, Andrew J., Sherrier, D. Janine, Shi, Ruihua, Sims, Sarah, Singer, Susan R., Sinharoy, Senjuti, Sterck, Lieven, Viollet, Agnès, Wang, Bing-Bing, Wang, Keqin, Wang, Mingyi, Wang, Xiaohong, Warfsmann, Jens, Weissenbach, Jean, White, Doug D., White, Jim D., Wiley, Graham B., Wincker, Patrick, Xing, Yanbo, Yang, Limei, Yao, Ziyun, Ying, Fu, Zhai, Jixian, Zhou, Liping, Zuber, Antoine, Dénarié, Jean, Dixon, Richard A., May, Gregory D., Schwartz, David C., Rogers, Jane, Quétier, Francis, Town, Christopher D., Roe, Bruce A.
Publicado 2011