Position-Based Scanning for Comparative Genomics and Identification of Genetic Islands in Haemophilus influenzae Type b

Por Bergman, Nicholas H., Akerley, Brian J.
Publicado em 2003

Interactive metagenomic visualization in a Web browser

Por Ondov, Brian D, Bergman, Nicholas H, Phillippy, Adam M
Publicado em 2011

Comparative Transcriptional Profiling of Bacillus cereus Sensu Lato Strains during Growth in CO(2)-Bicarbonate and Aerobic Atmospheres

Por Passalacqua, Karla D., Varadarajan, Anjana, Byrd, Benjamin, Bergman, Nicholas H.
Publicado em 2009

Genomic fluidity: an integrative view of gene diversity within microbial populations

Por Kislyuk, Andrey O, Haegeman, Bart, Bergman, Nicholas H, Weitz, Joshua S
Publicado em 2011

The Superoxide Dismutases of Bacillus anthracis Do Not Cooperatively Protect against Endogenous Superoxide Stress

Por Passalacqua, Karla D., Bergman, Nicholas H., Herring-Palmer, Amy, Hanna, Philip
Publicado em 2006

Operon Prediction for Sequenced Bacterial Genomes without Experimental Information

Por Bergman, Nicholas H., Passalacqua, Karla D., Hanna, Philip C., Qin, Zhaohui S.
Publicado em 2007

Efficient mapping of Applied Biosystems SOLiD sequence data to a reference genome for functional genomic applications

Por Ondov, Brian D., Varadarajan, Anjana, Passalacqua, Karla D., Bergman, Nicholas H.
Publicado em 2008

The three-dimensional architecture of the class I ligase ribozyme

Por BERGMAN, NICHOLAS H., LAU, NELSON C., LEHNERT, VALERIE, WESTHOF, ERIC, BARTEL, DAVID P.
Publicado em 2004

A class I ligase ribozyme with reduced Mg(2+) dependence: Selection, sequence analysis, and identification of functional tertiary interactions

Por Bagby, Sarah C., Bergman, Nicholas H., Shechner, David M., Yen, Catherine, Bartel, David P.
Publicado em 2009

Identification and Genomic Analysis of a Novel Group C Orthobunyavirus Isolated from a Mosquito Captured near Iquitos, Peru

Por Treangen, Todd J., Schoeler, George, Phillippy, Adam M., Bergman, Nicholas H., Turell, Michael J.
Publicado no PLoS Negl Trop Dis (2016)

The Global Transcriptional Responses of Bacillus anthracis Sterne (34F(2)) and a ΔsodA1 Mutant to Paraquat Reveal Metal Ion Homeostasis Imbalances during Endogenous Superoxide Stre...

Por Passalacqua, Karla D., Bergman, Nicholas H., Lee, Jung Yeop, Sherman, David H., Hanna, Philip C.
Publicado em 2007

An alignment algorithm for bisulfite sequencing using the Applied Biosystems SOLiD System

Por Ondov, Brian D., Cochran, Charles, Landers, Mark, Meredith, Gavin D., Dudas, Miroslav, Bergman, Nicholas H.
Publicado em 2010

Structure and Complexity of a Bacterial Transcriptome

Por Passalacqua, Karla D., Varadarajan, Anjana, Ondov, Brian D., Okou, David T., Zwick, Michael E., Bergman, Nicholas H.
Publicado em 2009

Murine Macrophage Transcriptional Responses to Bacillus anthracis Infection and Intoxication

Por Bergman, Nicholas H., Passalacqua, Karla D., Gaspard, Renee, Shetron-Rama, Lynne M., Quackenbush, John, Hanna, Philip C.
Publicado em 2005

Transcriptional Profiling of the Bacillus anthracis Life Cycle In Vitro and an Implied Model for Regulation of Spore Formation

Por Bergman, Nicholas H., Anderson, Erica C., Swenson, Ellen E., Niemeyer, Matthew M., Miyoshi, Amy D., Hanna, Philip C.
Publicado em 2006

Strand-Specific RNA-Seq Reveals Ordered Patterns of Sense and Antisense Transcription in Bacillus anthracis

Por Passalacqua, Karla D., Varadarajan, Anjana, Weist, Charlotte, Ondov, Brian D., Byrd, Benjamin, Read, Timothy D., Bergman, Nicholas H.
Publicado em 2012

Transcriptomic and phylogenetic analysis of a bacterial cell cycle reveals strong associations between gene co-expression and evolution

Por Fang, Gang, Passalacqua, Karla D, Hocking, Jason, Llopis, Paula Montero, Gerstein, Mark, Bergman, Nicholas H, Jacobs-Wagner, Christine
Publicado em 2013

Mash: fast genome and metagenome distance estimation using MinHash

Por Ondov, Brian D., Treangen, Todd J., Melsted, Páll, Mallonee, Adam B., Bergman, Nicholas H., Koren, Sergey, Phillippy, Adam M.
Publicado no Genome Biol (2016)

Transcriptional Profiling of Bacillus anthracis during Infection of Host Macrophages

Por Bergman, Nicholas H., Anderson, Erica C., Swenson, Ellen E., Janes, Brian K., Fisher, Nathan, Niemeyer, Matthew M., Miyoshi, Amy D., Hanna, Philip C.
Publicado em 2007

Reducing assembly complexity of microbial genomes with single-molecule sequencing

Por Koren, Sergey, Harhay, Gregory P, Smith, Timothy PL, Bono, James L, Harhay, Dayna M, Mcvey, Scott D, Radune, Diana, Bergman, Nicholas H, Phillippy, Adam M
Publicado em 2013