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Mash: fast genome and metagenome distance estimation using MinHash

Mash extends the MinHash dimensionality-reduction technique to include a pairwise mutation distance and P value significance test, enabling the efficient clustering and search of massive sequence collections. Mash reduces large sequences and sequence sets to small, representative sketches, from whic...

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Detalles Bibliográficos
Publicado en:Genome Biol
Autores principales: Ondov, Brian D., Treangen, Todd J., Melsted, Páll, Mallonee, Adam B., Bergman, Nicholas H., Koren, Sergey, Phillippy, Adam M.
Formato: Artigo
Lenguaje:Inglês
Publicado: BioMed Central 2016
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Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC4915045/
https://ncbi.nlm.nih.gov/pubmed/27323842
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-016-0997-x
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