MetAMOS: a modular and open source metagenomic assembly and analysis pipeline

We describe MetAMOS, an open source and modular metagenomic assembly and analysis pipeline. MetAMOS represents an important step towards fully automated metagenomic analysis, starting with next-generation sequencing reads and producing genomic scaffolds, open-reading frames and taxonomic or function...

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Detalhes bibliográficos
Main Authors: Treangen, Todd J, Koren, Sergey, Sommer, Daniel D, Liu, Bo, Astrovskaya, Irina, Ondov, Brian, Darling, Aaron E, Phillippy, Adam M, Pop, Mihai
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2013
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Software
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4053804/
https://ncbi.nlm.nih.gov/pubmed/23320958
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2013-14-1-r2
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