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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline

We describe MetAMOS, an open source and modular metagenomic assembly and analysis pipeline. MetAMOS represents an important step towards fully automated metagenomic analysis, starting with next-generation sequencing reads and producing genomic scaffolds, open-reading frames and taxonomic or function...

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Détails bibliographiques
Auteurs principaux: Treangen, Todd J, Koren, Sergey, Sommer, Daniel D, Liu, Bo, Astrovskaya, Irina, Ondov, Brian, Darling, Aaron E, Phillippy, Adam M, Pop, Mihai
Format: Artigo
Langue:Inglês
Publié: BioMed Central 2013
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC4053804/
https://ncbi.nlm.nih.gov/pubmed/23320958
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2013-14-1-r2
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