MetAMOS: a modular and open source metagenomic assembly and analysis pipeline

We describe MetAMOS, an open source and modular metagenomic assembly and analysis pipeline. MetAMOS represents an important step towards fully automated metagenomic analysis, starting with next-generation sequencing reads and producing genomic scaffolds, open-reading frames and taxonomic or function...

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Bibliografiske detaljer
Main Authors: Treangen, Todd J, Koren, Sergey, Sommer, Daniel D, Liu, Bo, Astrovskaya, Irina, Ondov, Brian, Darling, Aaron E, Phillippy, Adam M, Pop, Mihai
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2013
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Software
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4053804/
https://ncbi.nlm.nih.gov/pubmed/23320958
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/gb-2013-14-1-r2
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