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GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data

BACKGROUND: Due the computational complexity of sequence alignment algorithms, various accelerated solutions have been proposed to speedup this analysis. NVBIO is the only available GPU library that accelerates sequence alignment of high-throughput NGS data, but has limited performance. In this arti...

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Dades bibliogràfiques
Publicat a:BMC Bioinformatics
Autors principals: Ahmed, Nauman, Lévy, Jonathan, Ren, Shanshan, Mushtaq, Hamid, Bertels, Koen, Al-Ars, Zaid
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2019
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC6815017/
https://ncbi.nlm.nih.gov/pubmed/31653208
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-019-3086-9
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