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Bayesian Top-Down Protein Sequence Alignment with Inferred Position-Specific Gap Penalties

We describe a Bayesian Markov chain Monte Carlo (MCMC) sampler for protein multiple sequence alignment (MSA) that, as implemented in the program GISMO and applied to large numbers of diverse sequences, is more accurate than the popular MSA programs MUSCLE, MAFFT, Clustal-Ω and Kalign. Features of GI...

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Detalles Bibliográficos
Publicado en:PLoS Comput Biol
Autores principales: Neuwald, Andrew F., Altschul, Stephen F.
Formato: Artigo
Lenguaje:Inglês
Publicado: Public Library of Science 2016
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Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC4871425/
https://ncbi.nlm.nih.gov/pubmed/27192614
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1004936
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