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Bayesian Top-Down Protein Sequence Alignment with Inferred Position-Specific Gap Penalties

We describe a Bayesian Markov chain Monte Carlo (MCMC) sampler for protein multiple sequence alignment (MSA) that, as implemented in the program GISMO and applied to large numbers of diverse sequences, is more accurate than the popular MSA programs MUSCLE, MAFFT, Clustal-Ω and Kalign. Features of GI...

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Vydáno v:PLoS Comput Biol
Hlavní autoři: Neuwald, Andrew F., Altschul, Stephen F.
Médium: Artigo
Jazyk:Inglês
Vydáno: Public Library of Science 2016
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On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC4871425/
https://ncbi.nlm.nih.gov/pubmed/27192614
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1004936
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