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KalignP: Improved multiple sequence alignments using position specific gap penalties in Kalign2

Summary: Kalign2 is one of the fastest and most accurate methods for multiple alignments. However, in contrast to other methods Kalign2 does not allow externally supplied position specific gap penalties. Here, we present a modification to Kalign2, KalignP, so that it accepts such penalties. Further,...

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書目詳細資料
Main Authors: Shu, Nanjiang, Elofsson, Arne
格式: Artigo
語言:Inglês
出版: Oxford University Press 2011
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在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC3106193/
https://ncbi.nlm.nih.gov/pubmed/21505030
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btr235
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