Evolutionary clues to DNA polymerase III β clamp structural mechanisms

Por Neuwald, Andrew F.
Publicado em 2003

Evolutionary clues to eukaryotic DNA clamp-loading mechanisms: analysis of the functional constraints imposed on replication factor C AAA+ ATPases

Por Neuwald, Andrew F.
Publicado em 2005

Hypothesis: bacterial clamp loader ATPase activation through DNA-dependent repositioning of the catalytic base and of a trans-acting catalytic threonine

Por Neuwald, Andrew F.
Publicado em 2006

Gα–Gβγ dissociation may be due to retraction of a buried lysine and disruption of an aromatic cluster by a GTP-sensing Arg–Trp pair

Por Neuwald, Andrew F.
Publicado em 2007

The glycine brace: a component of Rab, Rho, and Ran GTPases associated with hinge regions of guanine- and phosphate-binding loops

Por Neuwald, Andrew F
Publicado em 2009

The charge-dipole pocket: a defining feature of signaling pathway GTPase on-off switches

Por Neuwald, Andrew F.
Publicado em 2009

Rapid detection, classification and accurate alignment of up to a million or more related protein sequences

Por Neuwald, Andrew F.
Publicado em 2009

Rapid detection, classification and accurate alignment of up to a million or more related protein sequences

Por Neuwald, Andrew F.
Publicado em 2009

Bayesian classification of residues associated with protein functional divergence: Arf and Arf-like GTPases

Por Neuwald, Andrew F
Publicado em 2010

Surveying the Manifold Divergence of an Entire Protein Class for Statistical Clues to Underlying Biochemical Mechanisms

Por Neuwald, Andrew F.
Publicado em 2011

A Bayesian Sampler for Optimization of Protein Domain Hierarchies

Por Neuwald, Andrew F.
Publicado em 2014

Evaluating, Comparing, and Interpreting Protein Domain Hierarchies

Por Neuwald, Andrew F.
Publicado em 2014

PSI-BLAST searches using hidden Markov models of structural repeats: prediction of an unusual sliding DNA clamp and of β-propellers in UV-damaged DNA-binding protein

Por Neuwald, Andrew F., Poleksic, Aleksandar
Publicado em 2000

HEAT Repeats Associated with Condensins, Cohesins, and Other Complexes Involved in Chromosome-Related Functions

Por Neuwald, Andrew F., Hirano, Tatsuya
Publicado em 2000

Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model

Por Neuwald, Andrew F, Liu, Jun S
Publicado em 2004

Evolutionary constraints associated with functional specificity of the CMGC protein kinases MAPK, CDK, GSK, SRPK, DYRK, and CK2α

Por Kannan, Natarajan, Neuwald, Andrew F.
Publicado em 2004

Bayesian Top-Down Protein Sequence Alignment with Inferred Position-Specific Gap Penalties

Por Neuwald, Andrew F., Altschul, Stephen F.
Publicado no PLoS Comput Biol (2016)

Inference of Functionally-Relevant N-acetyltransferase Residues Based on Statistical Correlations

Por Neuwald, Andrew F., Altschul, Stephen F.
Publicado no PLoS Comput Biol (2016)

Analogous regulatory sites within the αC-β4 loop regions of ZAP-70 tyrosine kinase and AGC kinases

Por Kannan, Natarajan, Neuwald, Andrew F., Taylor, Susan S.
Publicado em 2007

The hallmark of AGC kinase functional divergence is its C-terminal tail, a cis-acting regulatory module

Por Kannan, Natarajan, Haste, Nina, Taylor, Susan S., Neuwald, Andrew F.
Publicado em 2007