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Efficient de novo assembly of large genomes using compressed data structures
De novo genome sequence assembly is important both to generate new sequence assemblies for previously uncharacterized genomes and to identify the genome sequence of individuals in a reference-unbiased way. We present memory efficient data structures and algorithms for assembly using the FM-index der...
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| Hlavní autoři: | , |
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| Médium: | Artigo |
| Jazyk: | Inglês |
| Vydáno: |
Cold Spring Harbor Laboratory Press
2012
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| Témata: | |
| On-line přístup: | https://ncbi.nlm.nih.gov/pmc/articles/PMC3290790/ https://ncbi.nlm.nih.gov/pubmed/22156294 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.126953.111 |
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