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Assembler for de novo assembly of large genomes

Assembling a large genome using next generation sequencing reads requires large computer memory and a long execution time. To reduce these requirements, we propose an extension-based assembler, called JR-Assembler, where J and R stand for “jumping” extension and read “remapping.” First, it uses the...

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Detalhes bibliográficos
Main Authors: Chu, Te-Chin, Lu, Chen-Hua, Liu, Tsunglin, Lee, Greg C., Li, Wen-Hsiung, Shih, Arthur Chun-Chieh
Formato: Artigo
Idioma:Inglês
Publicado em: National Academy of Sciences 2013
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC3767511/
https://ncbi.nlm.nih.gov/pubmed/23966565
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1073/pnas.1314090110
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