MultiFRAGing: Rapid and Simultaneous Genotyping of Multiple Alleles in a Single Reaction

le Petree, Cassidy, Varshney, Gaurav K.
Foilsithe in Sci Rep (2020)

DNA-guided genome editing using structure-guided endonucleases

le Varshney, Gaurav K., Burgess, Shawn M.
Foilsithe in Genome Biol (2016)

Investigation of retroviral integration preference via high-throughput sequencing

le LaFave, Matthew C, Varshney, Gaurav K, Burgess, Shawn M
Foilsithe 2012

GeIST: a pipeline for mapping integrated DNA elements

le LaFave, Matthew C., Varshney, Gaurav K., Burgess, Shawn M.
Foilsithe in Bioinformatics (2015)

CRISPR-STAT: an easy and reliable PCR-based method to evaluate target-specific sgRNA activity

le Carrington, Blake, Varshney, Gaurav K., Burgess, Shawn M., Sood, Raman
Foilsithe in Nucleic Acids Res (2015)

Expanding the CRISPR Toolbox in Zebrafish for Studying Development and Disease

le Liu, Kaili, Petree, Cassidy, Requena, Teresa, Varshney, Pratishtha, Varshney, Gaurav K.
Foilsithe in Front Cell Dev Biol (2019)

Small fish, big prospects: using zebrafish to unravel the mechanisms of hereditary hearing loss

le Vona, Barbara, Doll, Julia, Hofrichter, Michaela A. H., Haaf, Thomas, Varshney, Gaurav K.
Foilsithe in Hear Res (2020)

Goliath family E3 ligases regulate the recycling endosome pathway via VAMP3 ubiquitylation

le Yamazaki, Yasuo, Schönherr, Christina, Varshney, Gaurav K, Dogru, Murat, Hallberg, Bengt, Palmer, Ruth H
Foilsithe 2013

A Defined Zebrafish Line for High-Throughput Genetics and Genomics: NHGRI-1

le LaFave, Matthew C., Varshney, Gaurav K., Vemulapalli, Meghana, Mullikin, James C., Burgess, Shawn M.
Foilsithe 2014

Genotoxicity in Mice Following AAV Gene Delivery: A Safety Concern for Human Gene Therapy?

le Chandler, Randy J, LaFave, Matthew C, Varshney, Gaurav K, Burgess, Shawn M, Venditti, Charles P
Foilsithe in Mol Ther (2016)

MLV integration site selection is driven by strong enhancers and active promoters

le LaFave, Matthew C., Varshney, Gaurav K., Gildea, Derek E., Wolfsberg, Tyra G., Baxevanis, Andreas D., Burgess, Shawn M.
Foilsithe 2014

Altered Swimming Behaviors in Zebrafish Larvae Lacking Cannabinoid Receptor 2

le Acevedo-Canabal, Agnes, Colón-Cruz, Luis, Rodriguez-Morales, Roberto, Varshney, Gaurav K., Burgess, Shawn, González-Sepúlveda, Lorena, Yudowski, Guillermo, Behra, Martine
Foilsithe in Cannabis Cannabinoid Res (2019)

The Zebrafish Insertion Collection (ZInC): a web based, searchable collection of zebrafish mutations generated by DNA insertion

le Varshney, Gaurav K., Huang, Haigen, Zhang, Suiyuan, Lu, Jing, Gildea, Derek E., Yang, Zhongan, Wolfsberg, Tyra G., Lin, Shuo, Burgess, Shawn M.
Foilsithe 2013

Phenotype-driven chemical screening in zebrafish for compounds that inhibit collective cell migration identifies multiple pathways potentially involved in metastatic invasion

le Gallardo, Viviana E., Varshney, Gaurav K., Lee, Minnkyong, Bupp, Sujata, Xu, Lisha, Shinn, Paul, Crawford, Nigel P., Inglese, James, Burgess, Shawn M.
Foilsithe in Dis Model Mech (2015)

Genome-Wide Analysis of Transposon and Retroviral Insertions Reveals Preferential Integrations in Regions of DNA Flexibility

le Vrljicak, Pavle, Tao, Shijie, Varshney, Gaurav K., Quach, Helen Ngoc Bao, Joshi, Adita, LaFave, Matthew C., Burgess, Shawn M., Sampath, Karuna
Foilsithe in G3 (Bethesda) (2016)

Amyloid precursor protein-b facilitates cell adhesion during early development in zebrafish

le Banote, Rakesh Kumar, Chebli, Jasmine, Şatır, Tuğçe Munise, Varshney, Gaurav K., Camacho, Rafael, Ledin, Johan, Burgess, Shawn M., Abramsson, Alexandra, Zetterberg, Henrik
Foilsithe in Sci Rep (2020)

Transposon activation mutagenesis as a screening tool for identifying resistance to cancer therapeutics

le Chen, Li, Stuart, Lynda, Ohsumi, Toshiro K, Burgess, Shawn, Varshney, Gaurav K, Dastur, Anahita, Borowsky, Mark, Benes, Cyril, Lacy-Hulbert, Adam, Schmidt, Emmett V
Foilsithe 2013

Multiplex Conditional Mutagenesis Using Transgenic Expression of Cas9 and sgRNAs

le Yin, Linlin, Maddison, Lisette A., Li, Mingyu, Kara, Nergis, LaFave, Matthew C., Varshney, Gaurav K., Burgess, Shawn M., Patton, James G., Chen, Wenbiao
Foilsithe in Genetics (2015)

Transcriptomic Analyses of Inner Ear Sensory Epithelia in Zebrafish

le YAO, QI, WANG, LINGYU, MITTAL, RAHUL, YAN, DENISE, RICHMOND, MICHAEL T., DENYER, STEVEN, REQUENA, TERESA, LIU, KAILI, VARSHNEY, GAURAV K., LU, ZHONGMIN, LIU, XUE ZHONG
Foilsithe in Anat Rec (Hoboken) (2019)

A 3D Searchable Database of Transgenic Zebrafish Gal4 and Cre Lines for Functional Neuroanatomy Studies

le Marquart, Gregory D., Tabor, Kathryn M., Brown, Mary, Strykowski, Jennifer L., Varshney, Gaurav K., LaFave, Matthew C., Mueller, Thomas, Burgess, Shawn M., Higashijima, Shin-ichi, Burgess, Harold A.
Foilsithe in Front Neural Circuits (2015)