Reconstructing antibody repertoires from error-prone immunosequencing reads

מאת Shlemov, Alexander, Bankevich, Sergey, Bzikadze, Andrey, Turchaninova, Maria A., Safonova, Yana, Pevzner, Pavel A.
הוצא לאור ב J Immunol (2017)

Preparing Unbiased T-Cell Receptor and Antibody cDNA Libraries for the Deep Next Generation Sequencing Profiling

מאת Mamedov, Ilgar Z., Britanova, Olga V., Zvyagin, Ivan V., Turchaninova, Maria A., Bolotin, Dmitriy A., Putintseva, Ekaterina V., Lebedev, Yuriy B., Chudakov, Dmitriy M.
יצא לאור 2013

Application of nonsense-mediated primer exclusion (NOPE) for preparation of unique molecular barcoded libraries

מאת Shagin, Dmitriy A., Turchaninova, Maria A., Shagina, Irina A., Shugay, Mikhail, Zaretsky, Andrew R., Zueva, Olga I., Bolotin, Dmitriy A., Lukyanov, Sergey, Chudakov, Dmitriy M.
הוצא לאור ב BMC Genomics (2017)

Comparative Analysis of B-Cell Receptor Repertoires Induced by Live Yellow Fever Vaccine in Young and Middle-Age Donors

מאת Davydov, Alexey N., Obraztsova, Anna S., Lebedin, Mikhail Y., Turchaninova, Maria A., Staroverov, Dmitriy B., Merzlyak, Ekaterina M., Sharonov, George V., Kladova, Olga, Shugay, Mikhail, Britanova, Olga V., Chudakov, Dmitriy M.
הוצא לאור ב Front Immunol (2018)

RNA-Seq-Based TCR Profiling Reveals Persistently Increased Intratumoral Clonality in Responders to Anti-PD-1 Therapy

מאת Zhigalova, Ekaterina A., Izosimova, Anna I., Yuzhakova, Diana V., Volchkova, Lilia N., Shagina, Irina A., Turchaninova, Maria A., Serebrovskaya, Ekaterina O., Zagaynova, Elena V., Chudakov, Dmitriy M., Sharonov, George V.
הוצא לאור ב Front Oncol (2020)

Mother and Child T Cell Receptor Repertoires: Deep Profiling Study

מאת Putintseva, Ekaterina V., Britanova, Olga V., Staroverov, Dmitriy B., Merzlyak, Ekaterina M., Turchaninova, Maria A., Shugay, Mikhail, Bolotin, Dmitriy A., Pogorelyy, Mikhail V., Mamedov, Ilgar Z., Bobrynina, Vlasta, Maschan, Mikhail, Lebedev, Yuri B., Chudakov, Dmitriy M.
יצא לאור 2013

VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires

מאת Shugay, Mikhail, Bagaev, Dmitriy V., Turchaninova, Maria A., Bolotin, Dmitriy A., Britanova, Olga V., Putintseva, Ekaterina V., Pogorelyy, Mikhail V., Nazarov, Vadim I., Zvyagin, Ivan V., Kirgizova, Vitalina I., Kirgizov, Kirill I., Skorobogatova, Elena V., Chudakov, Dmitriy M.
הוצא לאור ב PLoS Comput Biol (2015)

Quantitative tracking of T cell clones after haematopoietic stem cell transplantation

מאת Mamedov, Ilgar Z, Britanova, Olga V, Bolotin, Dmitriy A, Chkalina, Anna V, Staroverov, Dmitriy B, Zvyagin, Ivan V, Kotlobay, Alexey A, Turchaninova, Maria A, Fedorenko, Denis A, Novik, Andrew A, Sharonov, George V, Lukyanov, Sergey, Chudakov, Dmitriy M, Lebedev, Yuri B
יצא לאור 2011

PiggyBac transposon tools for recessive screening identify B-cell lymphoma drivers in mice

מאת Weber, Julia, de la Rosa, Jorge, Grove, Carolyn S., Schick, Markus, Rad, Lena, Baranov, Olga, Strong, Alexander, Pfaus, Anja, Friedrich, Mathias J., Engleitner, Thomas, Lersch, Robert, Öllinger, Rupert, Grau, Michael, Menendez, Irene Gonzalez, Martella, Manuela, Kohlhofer, Ursula, Banerjee, Ruby, Turchaninova, Maria A., Scherger, Anna, Hoffman, Gary J., Hess, Julia, Kuhn, Laura B., Ammon, Tim, Kim, Johnny, Schneider, Günter, Unger, Kristian, Zimber-Strobl, Ursula, Heikenwälder, Mathias, Schmidt-Supprian, Marc, Yang, Fengtang, Saur, Dieter, Liu, Pentao, Steiger, Katja, Chudakov, Dmitriy M., Lenz, Georg, Quintanilla-Martinez, Leticia, Keller, Ulrich, Vassiliou, George S., Cadiñanos, Juan, Bradley, Allan, Rad, Roland
הוצא לאור ב Nat Commun (2019)