2D Representation of Transcriptomes by t-SNE Exposes Relatedness between Human Tissues

od Taskesen, Erdogan, Reinders, Marcel J. T.
Wydane w PLoS One (2016)

An integrated approach of gene expression and DNA-methylation profiles of WNT signaling genes uncovers novel prognostic markers in Acute Myeloid Leukemia

od Taskesen, Erdogan, Staal, Frank JT, Reinders, Marcel JT
Wydane w BMC Bioinformatics (2015)

Hypergeometric analysis of tiling-array and sequence data: detection and interpretation of peaks

od Taskesen, Erdogan, Hoogeboezem, Remco, Delwel, Ruud, Reinders, Marcel JT
Wydane 2013

Functional mapping and annotation of genetic associations with FUMA

od Watanabe, Kyoko, Taskesen, Erdogan, van Bochoven, Arjen, Posthuma, Danielle
Wydane w Nat Commun (2017)

Integration of gene expression and DNA-methylation profiles improves molecular subtype classification in acute myeloid leukemia

od Taskesen, Erdogan, Babaei, Sepideh, Reinders, Marcel MJ, de Ridder, Jeroen
Wydane w BMC Bioinformatics (2015)

High Levels of Canonical Wnt Signaling Lead to Loss of Stemness and Increased Differentiation in Hematopoietic Stem Cells

od Famili, Farbod, Brugman, Martijn H., Taskesen, Erdogan, Naber, Brigitta E.A., Fodde, Riccardo, Staal, Frank J.T.
Wydane w Stem Cell Reports (2016)

HAT: Hypergeometric Analysis of Tiling-arrays with application to promoter-GeneChip data

od Taskesen, Erdogan, Beekman, Renee, de Ridder, Jeroen, Wouters, Bas J, Peeters, Justine K, Touw, Ivo P, Reinders, Marcel JT, Delwel, Ruud
Wydane 2010

Retroviral Integration Mutagenesis in Mice and Comparative Analysis in Human AML Identify Reduced PTP4A3 Expression as a Prognostic Indicator

od Beekman, Renée, Valkhof, Marijke, Erkeland, Stefan J., Taskesen, Erdogan, Rockova, Veronika, Peeters, Justine K., Valk, Peter J. M., Löwenberg, Bob, Touw, Ivo P.
Wydane 2011

Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics

od Taskesen, Erdogan, Huisman, Sjoerd M. H., Mahfouz, Ahmed, Krijthe, Jesse H., de Ridder, Jeroen, van de Stolpe, Anja, van den Akker, Erik, Verheagh, Wim, Reinders, Marcel J. T.
Wydane w Sci Rep (2016)

Author Correction: Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics

od Taskesen, Erdogan, Huisman, Sjoerd M. H., Mahfouz, Ahmed, Krijthe, Jesse H., de Ridder, Jeroen, van de Stolpe, Anja, van den Akker, Erik, Verhaegh, Wim, Reinders, Marcel J. T.
Wydane w Sci Rep (2018)

EVI1 is critical for the pathogenesis of a subset of MLL-AF9–rearranged AMLs

od Bindels, Eric M. J., Havermans, Marije, Lugthart, Sanne, Erpelinck, Claudia, Wocjtowicz, Elizabeth, Krivtsov, Andrei V., Rombouts, Elwin, Armstrong, Scott A., Taskesen, Erdogan, Haanstra, Jurgen R., Beverloo, H. Berna, Döhner, Hartmut, Hudson, Wendy A., Kersey, John H., Delwel, Ruud, Kumar, Ashish R.
Wydane 2012

MiR-17/20/93/106 promote hematopoietic cell expansion by targeting sequestosome 1–regulated pathways in mice

od Meenhuis, Annemarie, van Veelen, Peter A., de Looper, Hans, van Boxtel, Nicole, van den Berge, Iris J., Sun, Su M., Taskesen, Erdogan, Stern, Patrick, de Ru, Arnoud H., van Adrichem, Arjan J., Demmers, Jeroen, Jongen-Lavrencic, Mojca, Löwenberg, Bob, Touw, Ivo P., Sharp, Phillip A., Erkeland, Stefan J.
Wydane 2011

Genome-wide association analysis of insomnia complaints identifies risk genes and genetic overlap with psychiatric and metabolic traits

od Hammerschlag, Anke R, Stringer, Sven, de Leeuw, Christiaan A, Sniekers, Suzanne, Taskesen, Erdogan, Watanabe, Kyoko, Blanken, Tessa F, Dekker, Kim, te Lindert, Bart HW, Wassing, Rick, Jonsdottir, Ingileif, Thorleifsson, Gudmar, Stefansson, Hreinn, Gislason, Thorarinn, Berger, Klaus, Schormair, Barbara, Wellmann, Juergen, Winkelmann, Juliane, Stefansson, Kari, Oexle, Konrad, Van Someren, Eus JW, Posthuma, Danielle
Wydane w Nat Genet (2017)

Genome-wide association meta-analysis of 78,308 individuals identifies new loci and genes influencing human intelligence

od Sniekers, Suzanne, Stringer, Sven, Watanabe, Kyoko, Jansen, Philip R, Coleman, Jonathan RI, Krapohl, Eva, Taskesen, Erdogan, Hammerschlag, Anke R, Okbay, Aysu, Zabaneh, Delilah, Amin, Najaf, Breen, Gerome, Cesarini, David, Chabris, Christopher F, Iacono, William G, Ikram, M. Arfan, Johannesson, Magnus, Koellinger, Philipp, Lee, James J, Magnusson, Patrik K. E., McGue, Matt, Miller, Mike B., Ollier, William ER, Payton, Antony, Pendleton, Neil, Plomin, Robert, Rietveld, Cornelius A, Tiemeier, Henning, van Duijn, Cornelia M, Posthuma, Danielle
Wydane w Nat Genet (2017)

An epigenome-wide association study meta-analysis of educational attainment

od Karlsson Linnér, Richard, Marioni, Riccardo E, Rietveld, Cornelius A, Simpkin, Andrew J, Davies, Neil M, Watanabe, Kyoko, Armstrong, Nicola J, Auro, Kirsi, Baumbach, Clemens, Jan Bonder, Marc, Buchwald, Jadwiga, Fiorito, Giovanni, Ismail, Khadeeja, Iurato, Stella, Joensuu, Anni, Karell, Pauliina, Kasela, Silva, Lahti, Jari, McRae, Allan F, Mandaviya, Pooja R, Seppälä, Ilkka, Wang, Yunzhang, Baglietto, Laura, Binder, Elisabeth B, Harris, Sarah E, Hodge, Allison M, Horvath, Steve, Hurme, Mikko, Johannesson, Magnus, Latvala, Antti, Mather, Karen A, Medland, Sarah E, Metspalu, Andres, Milani, Lili, Milne, Roger L, Pattie, Alison, Pedersen, Nancy L, Peters, Annette, Polidoro, Silvia, Räikkönen, Katri, Severi, Gianluca, Starr, John M, Stolk, Lisette, Waldenberger, Melanie, Eriksson, Johan G, Esko, Tõnu, Franke, Lude, Gieger, Christian, Giles, Graham G, Hägg, Sara, Jousilahti, Pekka, Kaprio, Jaakko, Kähönen, Mika, Lehtimäki, Terho, Martin, Nicholas G, van Meurs, Joyce B C, Ollikainen, Miina, Perola, Markus, Posthuma, Danielle, Raitakari, Olli T, Sachdev, Perminder S, Taskesen, Erdogan, Uitterlinden, André G, Vineis, Paolo, Wijmenga, Cisca, Wright, Margaret J, Relton, Caroline, Davey Smith, George, Deary, Ian J, Koellinger, Philipp D, Benjamin, Daniel J
Wydane w Mol Psychiatry (2017)

Genome-wide association analyses of risk tolerance and risky behaviors in over one million individuals identify hundreds of loci and shared genetic influences

od Linnér, Richard Karlsson, Biroli, Pietro, Kong, Edward, Meddens, S Fleur W, Wedow, Robbee, Fontana, Mark Alan, Lebreton, Maël, Tino, Stephen P, Abdellaoui, Abdel, Hammerschlag, Anke R, Nivard, Michel G, Okbay, Aysu, Rietveld, Cornelius A, Timshel, Pascal N, Trzaskowski, Maciej, de Vlaming, Ronald, Zünd, Christian L, Bao, Yanchun, Buzdugan, Laura, Caplin, Ann H, Chen, Chia-Yen, Eibich, Peter, Fontanillas, Pierre, Gonzalez, Juan R, Joshi, Peter K, Karhunen, Ville, Kleinman, Aaron, Levin, Remy Z, Lill, Christina M, Meddens, Gerardus A, Muntané, Gerard, Sanchez-Roige, Sandra, van Rooij, Frank J, Taskesen, Erdogan, Wu, Yang, Zhang, Futao, Auton, Adam, Boardman, Jason D, Clark, David W, Conlin, Andrew, Dolan, Conor C, Fischbacher, Urs, Groenen, Patrick J F, Harris, Kathleen Mullan, Hasler, Gregor, Hofman, Albert, Ikram, Mohammad A, Jain, Sonia, Karlsson, Robert, Kessler, Ronald C, Kooyman, Maarten, MacKillop, James, Männikkö, Minna, Morcillo-Suarez, Carlos, McQueen, Matthew B, Schmidt, Klaus M, Smart, Melissa C, Sutter, Matthias, Thurik, A Roy, Uitterlinden, André G, White, Jon, de Wit, Harriet, Yang, Jian, Bertram, Lars, Boomsma, Dorret I, Esko, Tõnu, Fehr, Ernst, Hinds, David A, Johannesson, Magnus, Kumari, Meena, Laibson, David, Magnusson, Patrik K E, Meyer, Michelle N, Navarro, Arcadi, Palmer, Abraham A, Pers, Tune H, Posthuma, Danielle, Schunk, Daniel, Stein, Murray B, Svento, Rauli, Tiemeier, Henning, Timmers, Paul R H J, Turley, Patrick, Ursano, Robert J, Wagner, Gert G, Wilson, James F, Gratten, Jacob, Lee, James J, Cesarini, David, Benjamin, Daniel J, Koellinger, Philipp D, Beauchamp, Jonathan P
Wydane w Nat Genet (2019)