Outlier analysis of functional genomic profiles enriches for oncology targets and enables precision medicine

Por Zhu, Zhou, Ihle, Nathan T., Rejto, Paul A., Zarrinkar, Patrick P.
Publicado no BMC Genomics (2016)

Statistical method on nonrandom clustering with application to somatic mutations in cancer

Por Ye, Jingjing, Pavlicek, Adam, Lunney, Elizabeth A, Rejto, Paul A, Teng, Chi-Hse
Publicado em 2010

Simulating disorder–order transitions in molecular recognition of unstructured proteins: Where folding meets binding

Por Verkhivker, Gennady M., Bouzida, Djamal, Gehlhaar, Daniel K., Rejto, Paul A., Freer, Stephan T., Rose, Peter W.
Publicado em 2003

Whole Exome Sequencing of Rapid Autopsy Tumors and Xenograft Models Reveals Possible Driver Mutations Underlying Tumor Progression

Por Xie, Tao, Musteanu, Monica, Lopez-Casas, Pedro P., Shields, David J., Olson, Peter, Rejto, Paul A., Hidalgo, Manuel
Publicado no PLoS One (2015)

TNER: a novel background error suppression method for mutation detection in circulating tumor DNA

Por Deng, Shibing, Lira, Maruja, Huang, Donghui, Wang, Kai, Valdez, Crystal, Kinong, Jennifer, Rejto, Paul A., Bienkowska, Jadwiga, Hardwick, James, Xie, Tao
Publicado no BMC Bioinformatics (2018)

Dose-dependent effects of small-molecule antagonists on the genomic landscape of androgen receptor binding

Por Zhu, Zhou, Shi, Manli, Hu, Wenyue, Estrella, Heather, Engebretsen, Jon, Nichols, Tim, Briere, David, Hosea, Natilie, Los, Gerrit, Rejto, Paul A, Fanjul, Andrea
Publicado em 2012

Correction: A Novel SND1-BRAF Fusion Confers Resistance to c-Met Inhibitor PF-04217903 in GTL16 Cells though MAPK Activation

Por Lee, Nathan V., Lira, Maruja E., Pavlicek, Adam, Ye, Jingjing, Buckman, Dana, Bagrodia, Shubha, Srinivasa, Sreesha P., Zhao, Yongjun, Aparicio, Samuel, Rejto, Paul A., Christensen, James G., Ching, Keith A.
Publicado em 2012

A Novel SND1-BRAF Fusion Confers Resistance to c-Met Inhibitor PF-04217903 in GTL16 Cells though MAPK Activation

Por Lee, Nathan V., Lira, Maruja E., Pavlicek, Adam, Ye, Jingjing, Buckman, Dana, Bagrodia, Shubha, Srinivasa, Sreesha P., Zhao, Yongjun, Aparicio, Samuel, Rejto, Paul A., Christensen, James G., Ching, Keith A.
Publicado em 2012

Cross-species analysis of genetically engineered mouse models of MAPK-driven colorectal cancer identifies hallmarks of the human disease

Por Belmont, Peter J., Budinska, Eva, Jiang, Ping, Sinnamon, Mark J., Coffee, Erin, Roper, Jatin, Xie, Tao, Rejto, Paul A., Derkits, Sahra, Sansom, Owen J., Delorenzi, Mauro, Tejpar, Sabine, Hung, Kenneth E., Martin, Eric S.
Publicado em 2014

A Comprehensive Characterization of Genome-Wide Copy Number Aberrations in Colorectal Cancer Reveals Novel Oncogenes and Patterns of Alterations

Por Xie, Tao, d’ Ario, Giovanni, Lamb, John R., Martin, Eric, Wang, Kai, Tejpar, Sabine, Delorenzi, Mauro, Bosman, Fred T., Roth, Arnaud D., Yan, Pu, Bougel, Stephanie, Di Narzo, Antonio Fabio, Popovici, Vlad, Budinská, Eva, Mao, Mao, Weinrich, Scott L., Rejto, Paul A., Hodgson, J. Graeme
Publicado em 2012

Whole-genome sequencing identifies recurrent mutations in hepatocellular carcinoma

Por Kan, Zhengyan, Zheng, Hancheng, Liu, Xiao, Li, Shuyu, Barber, Thomas D., Gong, Zhuolin, Gao, Huan, Hao, Ke, Willard, Melinda D., Xu, Jiangchun, Hauptschein, Robert, Rejto, Paul A., Fernandez, Julio, Wang, Guan, Zhang, Qinghui, Wang, Bo, Chen, Ronghua, Wang, Jian, Lee, Nikki P., Zhou, Wei, Lin, Zhao, Peng, Zhiyu, Yi, Kang, Chen, Shengpei, Li, Lin, Fan, Xiaomei, Yang, Jie, Ye, Rui, Ju, Jia, Wang, Kai, Estrella, Heather, Deng, Shibing, Wei, Ping, Qiu, Ming, Wulur, Isabella H., Liu, Jiangang, Ehsani, Mariam E., Zhang, Chunsheng, Loboda, Andrey, Sung, Wing Kin, Aggarwal, Amit, Poon, Ronnie T., Fan, Sheung Tat, Wang, Jun, Hardwick, James, Reinhard, Christoph, Dai, Hongyue, Li, Yingrui, Luk, John M., Mao, Mao
Publicado em 2013