Mass Spectrometry Analysis of Pseudomonas aeruginosa Treated With Azithromycin

by Phelan, Vanessa V., Fang, Jinshu, Dorrestein, Pieter C.
Published in J Am Soc Mass Spectrom (2015)

Microbial metabolic exchange—the chemotype-to-phenotype link

by Phelan, Vanessa V, Liu, Wei-Ting, Pogliano, Kit, Dorrestein, Pieter C
Published 2011

Adenylation enzyme characterization using γ-(18)O(4)-ATP pyrophosphate exchange

by Phelan, Vanessa V., Du, Yu, McLean, John A., Bachmann, Brian O.
Published 2009

Microbiome and Metabolome Data Integration Provides Insight Into Health and Disease

by Shaffer, Michael, Armstrong, Abigail JS, Phelan, Vanessa V, Reisdorph, Nichole, Lozupone, Catherine A
Published in Transl Res (2017)

Lipophilic Mediated Assays for β-Hematin Inhibitors

by Carter, Melissa D., Phelan, Vanessa V., Sandlin, Rebecca D., Bachmann, Brian O., Wright, David W.
Published 2010

Exogenous Alginate Protects Staphylococcus aureus from Killing by Pseudomonas aeruginosa

by Price, Courtney E., Brown, Dustin G., Limoli, Dominique H., Phelan, Vanessa V., O’Toole, George A.
Published in J Bacteriol (2020)

Interkingdom metabolic transformations captured by microbial imaging mass spectrometry

by Moree, Wilna J., Phelan, Vanessa V., Wu, Cheng-Hsuan, Bandeira, Nuno, Cornett, Dale S., Duggan, Brendan M., Dorrestein, Pieter C.
Published 2012

Microbial metabolic exchange in 3D

by Watrous, Jeramie D, Phelan, Vanessa V, Hsu, Cheng-Chih, Moree, Wilna J, Duggan, Brendan M, Alexandrov, Theodore, Dorrestein, Pieter C
Published 2013

Impact of a Transposon Insertion in phzF2 on the Specialized Metabolite Production and Interkingdom Interactions of Pseudomonas aeruginosa

by Phelan, Vanessa V., Moree, Wilna J., Aguilar, Julieta, Cornett, Dale S., Koumoutsi, Alexandra, Noble, Suzanne M., Pogliano, Kit, Guerrero, Carlos A., Dorrestein, Pieter C.
Published 2014

Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle

by Panosian, Timothy D., Nannemann, David P., Watkins, Guy R., Phelan, Vanessa V., McDonald, W. Hayes, Wadzinski, Brian E., Bachmann, Brian O., Iverson, Tina M.
Published 2011

Natural Products as Mediators of Disease

by Garg, Neha, Luzzatto-Knaan, Tal, Melnik, Alexey V., Caraballo-Rodríguez, Andrés Mauricio, Floros, Dimitrios J., Petras, Daniel, Gregor, Rachel, Dorrestein, Pieter C., Phelan, Vanessa V.
Published in Nat Prod Rep (2016)

Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

by Quinn, Robert A, Phelan, Vanessa V, Whiteson, Katrine L, Garg, Neha, Bailey, Barbara A, Lim, Yan Wei, Conrad, Douglas J, Dorrestein, Pieter C, Rohwer, Forest L
Published in ISME J (2016)

Primer on Agar-Based Microbial Imaging Mass Spectrometry

by Yang, Jane Y., Phelan, Vanessa V., Simkovsky, Ryan, Watrous, Jeramie D., Trial, Rachelle M., Fleming, Tinya C., Wenter, Roland, Moore, Bradley S., Golden, Susan S., Pogliano, Kit, Dorrestein, Pieter C.
Published 2012

MS/MS networking guided analysis of molecule and gene cluster families

by Nguyen, Don Duy, Wu, Cheng-Hsuan, Moree, Wilna J., Lamsa, Anne, Medema, Marnix H., Zhao, Xiling, Gavilan, Ronnie G., Aparicio, Marystella, Atencio, Librada, Jackson, Chanaye, Ballesteros, Javier, Sanchez, Joel, Watrous, Jeramie D., Phelan, Vanessa V., van de Wiel, Corine, Kersten, Roland D., Mehnaz, Samina, De Mot, René, Shank, Elizabeth A., Charusanti, Pep, Nagarajan, Harish, Duggan, Brendan M., Moore, Bradley S., Bandeira, Nuno, Palsson, Bernhard Ø., Pogliano, Kit, Gutiérrez, Marcelino, Dorrestein, Pieter C.
Published 2013

Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads

by Sanders, Jon G., Nurk, Sergey, Salido, Rodolfo A., Minich, Jeremiah, Xu, Zhenjiang Z., Zhu, Qiyun, Martino, Cameron, Fedarko, Marcus, Arthur, Timothy D., Chen, Feng, Boland, Brigid S., Humphrey, Greg C., Brennan, Caitriona, Sanders, Karenina, Gaffney, James, Jepsen, Kristen, Khosroheidari, Mahdieh, Green, Cliff, Liyanage, Marlon, Dang, Jason W., Phelan, Vanessa V., Quinn, Robert A., Bankevich, Anton, Chang, John T., Rana, Tariq M., Conrad, Douglas J., Sandborn, William J., Smarr, Larry, Dorrestein, Pieter C., Pevzner, Pavel A., Knight, Rob
Published in Genome Biol (2019)

Feature-Based Molecular Networking in the GNPS Analysis Environment

by Nothias, Louis Felix, Petras, Daniel, Schmid, Robin, Dührkop, Kai, Rainer, Johannes, Sarvepalli, Abinesh, Protsyuk, Ivan, Ernst, Madeleine, Tsugawa, Hiroshi, Fleischauer, Markus, Aicheler, Fabian, Aksenov, Alexander, Alka, Oliver, Allard, Pierre-Marie, Barsch, Aiko, Cachet, Xavier, Caraballo, Mauricio, Silva, Ricardo R. Da, Dang, Tam, Garg, Neha, Gauglitz, Julia M., Gurevich, Alexey, Isaac, Giorgis, Jarmusch, Alan K., Kameník, Zdeněk, Kang, Kyo Bin, Kessler, Nikolas, Koester, Irina, Korf, Ansgar, Gouellec, Audrey Le, Ludwig, Marcus, H., Christian Martin, McCall, Laura-Isobel, McSayles, Jonathan, Meyer, Sven W., Mohimani, Hosein, Morsy, Mustafa, Moyne, Oriane, Neumann, Steffen, Neuweger, Heiko, Nguyen, Ngoc Hung, Nothias-Esposito, Melissa, Paolini, Julien, Phelan, Vanessa V., Pluskal, Tomáš, Quinn, Robert A., Rogers, Simon, Shrestha, Bindesh, Tripathi, Anupriya, van der Hooft, Justin J.J., Vargas, Fernando, Weldon, Kelly C., Witting, Michael, Yang, Heejung, Zhang, Zheng, Zubeil, Florian, Kohlbacher, Oliver, Böcker, Sebastian, Alexandrov, Theodore, Bandeira, Nuno, Wang, Mingxun, Dorrestein, Pieter C.
Published in Nat Methods (2020)

Sharing and community curation of mass spectrometry data with GNPS

by Wang, Mingxun, Carver, Jeremy J, Phelan, Vanessa V, Sanchez, Laura M, Garg, Neha, Peng, Yao, Nguyen, Don Duy, Watrous, Jeramie, Kapono, Clifford A, Luzzatto-Knaan, Tal, Porto, Carla, Bouslimani, Amina, Melnik, Alexey V, Meehan, Michael J, Liu, Wei-Ting, Crüsemann, Max, Boudreau, Paul D, Esquenazi, Eduardo, Sandoval-Calderón, Mario, Kersten, Roland D, Pace, Laura A, Quinn, Robert A, Duncan, Katherine R, Hsu, Cheng-Chih, Floros, Dimitrios J, Gavilan, Ronnie G, Kleigrewe, Karin, Northen, Trent, Dutton, Rachel J, Parrot, Delphine, Carlson, Erin E, Aigle, Bertrand, Michelsen, Charlotte F, Jelsbak, Lars, Sohlenkamp, Christian, Pevzner, Pavel, Edlund, Anna, McLean, Jeffrey, Piel, Jörn, Murphy, Brian T, Gerwick, Lena, Liaw, Chih-Chuang, Yang, Yu-Liang, Humpf, Hans-Ulrich, Maansson, Maria, Keyzers, Robert A, Sims, Amy C, Johnson, Andrew R., Sidebottom, Ashley M, Sedio, Brian E, Klitgaard, Andreas, Larson, Charles B, P., Cristopher A Boya, Torres-Mendoza, Daniel, Gonzalez, David J, Silva, Denise B, Marques, Lucas M, Demarque, Daniel P, Pociute, Egle, O'Neill, Ellis C, Briand, Enora, Helfrich, Eric J. N., Granatosky, Eve A, Glukhov, Evgenia, Ryffel, Florian, Houson, Hailey, Mohimani, Hosein, Kharbush, Jenan J, Zeng, Yi, Vorholt, Julia A, Kurita, Kenji L, Charusanti, Pep, McPhail, Kerry L, Nielsen, Kristian Fog, Vuong, Lisa, Elfeki, Maryam, Traxler, Matthew F, Engene, Niclas, Koyama, Nobuhiro, Vining, Oliver B, Baric, Ralph, Silva, Ricardo R, Mascuch, Samantha J, Tomasi, Sophie, Jenkins, Stefan, Macherla, Venkat, Hoffman, Thomas, Agarwal, Vinayak, Williams, Philip G, Dai, Jingqui, Neupane, Ram, Gurr, Joshua, Rodríguez, Andrés M. C., Lamsa, Anne, Zhang, Chen, Dorrestein, Kathleen, Duggan, Brendan M, Almaliti, Jehad, Allard, Pierre-Marie, Phapale, Prasad, Nothias, Louis-Felix, Alexandrov, Theodore, Litaudon, Marc, Wolfender, Jean-Luc, Kyle, Jennifer E, Metz, Thomas O, Peryea, Tyler, Nguyen, Dac-Trung, VanLeer, Danielle, Shinn, Paul, Jadhav, Ajit, Müller, Rolf, Waters, Katrina M, Shi, Wenyuan, Liu, Xueting, Zhang, Lixin, Knight, Rob, Jensen, Paul R, Palsson, Bernhard O, Pogliano, Kit, Linington, Roger G, Gutiérrez, Marcelino, Lopes, Norberto P, Gerwick, William H, Moore, Bradley S, Dorrestein, Pieter C, Bandeira, Nuno
Published in Nat Biotechnol (2016)