Spectral Library Generating Function for Assessing Spectrum-Spectrum Match Significance

Por Wang, Mingxun, Bandeira, Nuno
Publicado em 2013

Significance estimation for large scale metabolomics annotations by spectral matching

Por Scheubert, Kerstin, Hufsky, Franziska, Petras, Daniel, Wang, Mingxun, Nothias, Louis-Félix, Dührkop, Kai, Bandeira, Nuno, Dorrestein, Pieter C., Böcker, Sebastian
Publicado no Nat Commun (2017)

Lifestyle chemistries from phones for individual profiling

Por Bouslimani, Amina, Melnik, Alexey V., Xu, Zhenjiang, Amir, Amnon, da Silva, Ricardo R., Wang, Mingxun, Bandeira, Nuno, Alexandrov, Theodore, Knight, Rob, Dorrestein, Pieter C.
Publicado no Proc Natl Acad Sci U S A (2016)

Molecular Networking and Pattern-Based Genome Mining Improves discovery of biosynthetic gene clusters and their products from Salinispora species

Por Duncan, Katherine R., Crüsemann, Max, Lechner, Anna, Sarkar, Anindita, Li, Jie, Ziemert, Nadine, Wang, Mingxun, Bandeira, Nuno, Moore, Bradley S., Dorrestein, Pieter C., Jensen, Paul R.
Publicado no Chem Biol (2015)

Automated Genome Mining of Ribosomal Peptide Natural Products

Por Mohimani, Hosein, Kersten, Roland D., Liu, Wei-Ting, Wang, Mingxun, Purvine, Samuel O., Wu, Si, Brewer, Heather M., Pasa-Tolic, Ljiljana, Bandeira, Nuno, Moore, Bradley S., Pevzner, Pavel A., Dorrestein, Pieter C.
Publicado em 2014

Digitizing mass spectrometry data to explore the chemical diversity and distribution of marine cyanobacteria and algae

Por Luzzatto-Knaan, Tal, Garg, Neha, Wang, Mingxun, Glukhov, Evgenia, Peng, Yao, Ackermann, Gail, Amir, Amnon, Duggan, Brendan M, Ryazanov, Sergey, Gerwick, Lena, Knight, Rob, Alexandrov, Theodore, Bandeira, Nuno, Gerwick, William H, Dorrestein, Pieter C
Publicado no eLife (2017)

The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition

Por Deutsch, Eric W., Csordas, Attila, Sun, Zhi, Jarnuczak, Andrew, Perez-Riverol, Yasset, Ternent, Tobias, Campbell, David S., Bernal-Llinares, Manuel, Okuda, Shujiro, Kawano, Shin, Moritz, Robert L., Carver, Jeremy J., Wang, Mingxun, Ishihama, Yasushi, Bandeira, Nuno, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado no Nucleic Acids Res (2017)

Molecular cartography of the human skin surface in 3D

Por Bouslimani, Amina, Porto, Carla, Rath, Christopher M., Wang, Mingxun, Guo, Yurong, Gonzalez, Antonio, Berg-Lyon, Donna, Ackermann, Gail, Moeller Christensen, Gitte Julie, Nakatsuji, Teruaki, Zhang, Lingjuan, Borkowski, Andrew W., Meehan, Michael J., Dorrestein, Kathleen, Gallo, Richard L., Bandeira, Nuno, Knight, Rob, Alexandrov, Theodore, Dorrestein, Pieter C.
Publicado no Proc Natl Acad Sci U S A (2015)

SPLASH, A hashed identifier for mass spectra

Por Wohlgemuth, Gert, Mehta, Sajjan S., Mejia, Ramon F., Neumann, Steffen, Pedrosa, Diego, Pluskal, Tomáš, Schymanski, Emma L., Willighagen, Egon L., Wilson, Michael, Wishart, David S., Arita, Masanori, Dorrestein, Pieter C., Bandeira, Nuno, Wang, Mingxun, Schulze, Tobias, Salek, Reza M., Steinbeck, Christoph, Nainala, Venkata Chandrasekhar, Mistrik, Robert, Nishioka, Takaaki, Fiehn, Oliver
Publicado no Nat Biotechnol (2016)

Discovering and Linking Public ‘Omics’ Datasets using the Omics Discovery Index

Por Perez-Riverol, Yasset, Bai, Mingze, da Veiga Leprevost, Felipe, Squizzato, Silvano, Park, Young Mi, Haug, Kenneth, Carroll, Adam J., Spalding, Dylan, Paschall, Justin, Wang, Mingxun, del-Toro, Noemi, Ternent, Tobias, Zhang, Peng, Buso, Nicola, Bandeira, Nuno, Deutsch, Eric W., Campbell, David S, Beavis, Ronald C., Salek, Reza M., Sarkans, Ugis, Petryszak, Robert, Keays, Maria, Fahy, Eoin, Sud, Manish, Subramaniam, Shankar, Barbera, Ariana, Jiménez, Rafael C., Nesvizhskii, Alexey I., Sansone, Susanna-Assunta, Steinbeck, Christoph, Lopez, Rodrigo, Vizcaíno, Juan Antonio, Ping, Peipei, Hermjakob, Henning
Publicado no Nat Biotechnol (2017)

Sharing and community curation of mass spectrometry data with GNPS

Por Wang, Mingxun, Carver, Jeremy J, Phelan, Vanessa V, Sanchez, Laura M, Garg, Neha, Peng, Yao, Nguyen, Don Duy, Watrous, Jeramie, Kapono, Clifford A, Luzzatto-Knaan, Tal, Porto, Carla, Bouslimani, Amina, Melnik, Alexey V, Meehan, Michael J, Liu, Wei-Ting, Crüsemann, Max, Boudreau, Paul D, Esquenazi, Eduardo, Sandoval-Calderón, Mario, Kersten, Roland D, Pace, Laura A, Quinn, Robert A, Duncan, Katherine R, Hsu, Cheng-Chih, Floros, Dimitrios J, Gavilan, Ronnie G, Kleigrewe, Karin, Northen, Trent, Dutton, Rachel J, Parrot, Delphine, Carlson, Erin E, Aigle, Bertrand, Michelsen, Charlotte F, Jelsbak, Lars, Sohlenkamp, Christian, Pevzner, Pavel, Edlund, Anna, McLean, Jeffrey, Piel, Jörn, Murphy, Brian T, Gerwick, Lena, Liaw, Chih-Chuang, Yang, Yu-Liang, Humpf, Hans-Ulrich, Maansson, Maria, Keyzers, Robert A, Sims, Amy C, Johnson, Andrew R., Sidebottom, Ashley M, Sedio, Brian E, Klitgaard, Andreas, Larson, Charles B, P., Cristopher A Boya, Torres-Mendoza, Daniel, Gonzalez, David J, Silva, Denise B, Marques, Lucas M, Demarque, Daniel P, Pociute, Egle, O'Neill, Ellis C, Briand, Enora, Helfrich, Eric J. N., Granatosky, Eve A, Glukhov, Evgenia, Ryffel, Florian, Houson, Hailey, Mohimani, Hosein, Kharbush, Jenan J, Zeng, Yi, Vorholt, Julia A, Kurita, Kenji L, Charusanti, Pep, McPhail, Kerry L, Nielsen, Kristian Fog, Vuong, Lisa, Elfeki, Maryam, Traxler, Matthew F, Engene, Niclas, Koyama, Nobuhiro, Vining, Oliver B, Baric, Ralph, Silva, Ricardo R, Mascuch, Samantha J, Tomasi, Sophie, Jenkins, Stefan, Macherla, Venkat, Hoffman, Thomas, Agarwal, Vinayak, Williams, Philip G, Dai, Jingqui, Neupane, Ram, Gurr, Joshua, Rodríguez, Andrés M. C., Lamsa, Anne, Zhang, Chen, Dorrestein, Kathleen, Duggan, Brendan M, Almaliti, Jehad, Allard, Pierre-Marie, Phapale, Prasad, Nothias, Louis-Felix, Alexandrov, Theodore, Litaudon, Marc, Wolfender, Jean-Luc, Kyle, Jennifer E, Metz, Thomas O, Peryea, Tyler, Nguyen, Dac-Trung, VanLeer, Danielle, Shinn, Paul, Jadhav, Ajit, Müller, Rolf, Waters, Katrina M, Shi, Wenyuan, Liu, Xueting, Zhang, Lixin, Knight, Rob, Jensen, Paul R, Palsson, Bernhard O, Pogliano, Kit, Linington, Roger G, Gutiérrez, Marcelino, Lopes, Norberto P, Gerwick, William H, Moore, Bradley S, Dorrestein, Pieter C, Bandeira, Nuno
Publicado no Nat Biotechnol (2016)