Neurons in the Basal Forebrain Project to the Cortex in a Complex Topographic Organization that Reflects Corticocortical Connectivity Patterns: An Experimental Study Based on Retro...

Por Zaborszky, Laszlo, Csordas, Attila, Mosca, Kevin, Kim, Joseph, Gielow, Matthew R., Vadasz, Csaba, Nadasdy, Zoltan
Publicado no Cereb Cortex (2015)

PRIDE: Quality control in a proteomics data repository

Por Csordas, Attila, Ovelleiro, David, Wang, Rui, Foster, Joseph M., Ríos, Daniel, Vizcaíno, Juan Antonio, Hermjakob, Henning
Publicado em 2012

Exploring the potential of public proteomics data

Por Vaudel, Marc, Verheggen, Kenneth, Csordas, Attila, Ræder, Helge, Berven, Frode S., Martens, Lennart, Vizcaíno, Juan A., Barsnes, Harald
Publicado no Proteomics (2015)

Hydra: a scalable proteomic search engine which utilizes the Hadoop distributed computing framework

Por Lewis, Steven, Csordas, Attila, Killcoyne, Sarah, Hermjakob, Henning, Hoopmann, Michael R, Moritz, Robert L, Deutsch, Eric W, Boyle, John
Publicado em 2012

From Peptidome to PRIDE: Public proteomics data migration at a large scale

Por Csordas, Attila, Wang, Rui, Ríos, Daniel, Reisinger, Florian, Foster, Joseph M, Slotta, Douglas J, Vizcaíno, Juan Antonio, Hermjakob, Henning
Publicado em 2013

PRIDE Inspector: a tool to visualize and validate MS proteomics data

Por Wang, Rui, Fabregat, Antonio, Ríos, Daniel, Ovelleiro, David, Foster, Joseph M., Côté, Richard G., Griss, Johannes, Csordas, Attila, Perez-Riverol, Yasset, Reisinger, Florian, Hermjakob, Henning, Martens, Lennart, Vizcaíno, Juan Antonio
Publicado em 2012

2016 update of the PRIDE database and its related tools

Por Vizcaíno, Juan Antonio, Csordas, Attila, del-Toro, Noemi, Dianes, José A., Griss, Johannes, Lavidas, Ilias, Mayer, Gerhard, Perez-Riverol, Yasset, Reisinger, Florian, Ternent, Tobias, Xu, Qing-Wei, Wang, Rui, Hermjakob, Henning
Publicado no Nucleic Acids Res (2016)

2016 update of the PRIDE database and its related tools

Por Vizcaíno, Juan Antonio, Csordas, Attila, del-Toro, Noemi, Dianes, José A., Griss, Johannes, Lavidas, Ilias, Mayer, Gerhard, Perez-Riverol, Yasset, Reisinger, Florian, Ternent, Tobias, Xu, Qing-Wei, Wang, Rui, Hermjakob, Henning
Publicado no Nucleic Acids Res (2016)

PRIDE Inspector Toolsuite: Moving Toward a Universal Visualization Tool for Proteomics Data Standard Formats and Quality Assessment of ProteomeXchange Datasets

Por Perez-Riverol, Yasset, Xu, Qing-Wei, Wang, Rui, Uszkoreit, Julian, Griss, Johannes, Sanchez, Aniel, Reisinger, Florian, Csordas, Attila, Ternent, Tobias, del-Toro, Noemi, Dianes, Jose A., Eisenacher, Martin, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado no Mol Cell Proteomics (2016)

The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition

Por Deutsch, Eric W., Csordas, Attila, Sun, Zhi, Jarnuczak, Andrew, Perez-Riverol, Yasset, Ternent, Tobias, Campbell, David S., Bernal-Llinares, Manuel, Okuda, Shujiro, Kawano, Shin, Moritz, Robert L., Carver, Jeremy J., Wang, Mingxun, Ishihama, Yasushi, Bandeira, Nuno, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado no Nucleic Acids Res (2017)

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

Por Vizcaíno, Juan Antonio, Côté, Richard G., Csordas, Attila, Dianes, José A., Fabregat, Antonio, Foster, Joseph M., Griss, Johannes, Alpi, Emanuele, Birim, Melih, Contell, Javier, O’Kelly, Gavin, Schoenegger, Andreas, Ovelleiro, David, Pérez-Riverol, Yasset, Reisinger, Florian, Ríos, Daniel, Wang, Rui, Hermjakob, Henning
Publicado em 2013

The PRoteomics IDEntification (PRIDE) Converter 2 Framework: An Improved Suite of Tools to Facilitate Data Submission to the PRIDE Database and the ProteomeXchange Consortium

Por Côté, Richard G., Griss, Johannes, Dianes, José A., Wang, Rui, Wright, James C., van den Toorn, Henk W.P., van Breukelen, Bas, Heck, Albert J. R., Hulstaert, Niels, Martens, Lennart, Reisinger, Florian, Csordas, Attila, Ovelleiro, David, Perez-Rivevol, Yasset, Barsnes, Harald, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado em 2012

ProteomeXchange provides globally co-ordinated proteomics data submission and dissemination

Por Vizcaíno, Juan A., Deutsch, Eric W., Wang, Rui, Csordas, Attila, Reisinger, Florian, Ríos, Daniel, Dianes, José A., Sun, Zhi, Farrah, Terry, Bandeira, Nuno, Binz, Pierre-Alain, Xenarios, Ioannis, Eisenacher, Martin, Mayer, Gerhard, Gatto, Laurent, Campos, Alex, Chalkley, Robert J., Kraus, Hans-Joachim, Albar, Juan Pablo, Martinez-Bartolomé, Salvador, Apweiler, Rolf, Omenn, Gilbert S., Martens, Lennart, Jones, Andrew R., Hermjakob, Henning
Publicado em 2014