Recognizing millions of consistently unidentified spectra across hundreds of shotgun proteomics datasets

Por Griss, Johannes, Perez-Riverol, Yasset, Lewis, Steve, Tabb, David L., Dianes, José A., del-Toro, Noemi, Rurik, Marc, Walzer, Mathias W., Kohlbacher, Oliver, Hermjakob, Henning, Wang, Rui, Vizcaíno, Juan Antonio
Publicado no Nat Methods (2016)

2016 update of the PRIDE database and its related tools

Por Vizcaíno, Juan Antonio, Csordas, Attila, del-Toro, Noemi, Dianes, José A., Griss, Johannes, Lavidas, Ilias, Mayer, Gerhard, Perez-Riverol, Yasset, Reisinger, Florian, Ternent, Tobias, Xu, Qing-Wei, Wang, Rui, Hermjakob, Henning
Publicado no Nucleic Acids Res (2016)

2016 update of the PRIDE database and its related tools

Por Vizcaíno, Juan Antonio, Csordas, Attila, del-Toro, Noemi, Dianes, José A., Griss, Johannes, Lavidas, Ilias, Mayer, Gerhard, Perez-Riverol, Yasset, Reisinger, Florian, Ternent, Tobias, Xu, Qing-Wei, Wang, Rui, Hermjakob, Henning
Publicado no Nucleic Acids Res (2016)

PRIDE Inspector Toolsuite: Moving Toward a Universal Visualization Tool for Proteomics Data Standard Formats and Quality Assessment of ProteomeXchange Datasets

Por Perez-Riverol, Yasset, Xu, Qing-Wei, Wang, Rui, Uszkoreit, Julian, Griss, Johannes, Sanchez, Aniel, Reisinger, Florian, Csordas, Attila, Ternent, Tobias, del-Toro, Noemi, Dianes, Jose A., Eisenacher, Martin, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado no Mol Cell Proteomics (2016)

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

Por Vizcaíno, Juan Antonio, Côté, Richard G., Csordas, Attila, Dianes, José A., Fabregat, Antonio, Foster, Joseph M., Griss, Johannes, Alpi, Emanuele, Birim, Melih, Contell, Javier, O’Kelly, Gavin, Schoenegger, Andreas, Ovelleiro, David, Pérez-Riverol, Yasset, Reisinger, Florian, Ríos, Daniel, Wang, Rui, Hermjakob, Henning
Publicado em 2013

The PRoteomics IDEntification (PRIDE) Converter 2 Framework: An Improved Suite of Tools to Facilitate Data Submission to the PRIDE Database and the ProteomeXchange Consortium

Por Côté, Richard G., Griss, Johannes, Dianes, José A., Wang, Rui, Wright, James C., van den Toorn, Henk W.P., van Breukelen, Bas, Heck, Albert J. R., Hulstaert, Niels, Martens, Lennart, Reisinger, Florian, Csordas, Attila, Ovelleiro, David, Perez-Rivevol, Yasset, Barsnes, Harald, Hermjakob, Henning, Vizcaíno, Juan Antonio
Publicado em 2012

ProteomeXchange provides globally co-ordinated proteomics data submission and dissemination

Por Vizcaíno, Juan A., Deutsch, Eric W., Wang, Rui, Csordas, Attila, Reisinger, Florian, Ríos, Daniel, Dianes, José A., Sun, Zhi, Farrah, Terry, Bandeira, Nuno, Binz, Pierre-Alain, Xenarios, Ioannis, Eisenacher, Martin, Mayer, Gerhard, Gatto, Laurent, Campos, Alex, Chalkley, Robert J., Kraus, Hans-Joachim, Albar, Juan Pablo, Martinez-Bartolomé, Salvador, Apweiler, Rolf, Omenn, Gilbert S., Martens, Lennart, Jones, Andrew R., Hermjakob, Henning
Publicado em 2014