Combinations of Mutations in the Connection Domain of Human Immunodeficiency Virus Type 1 Reverse Transcriptase: Assessing the Impact on Nucleoside and Nonnucleoside Reverse Transc...

par Gupta, Soumi, Fransen, Signe, Paxinos, Ellen E., Stawiski, Eric, Huang, Wei, Petropoulos, Christos J.
Publié 2010

mtDNA from fossils reveals a radiation of Hawaiian geese recently derived from the Canada goose (Branta canadensis)

par Paxinos, Ellen E., James, Helen F., Olson, Storrs L., Sorenson, Michael D., Jackson, Jennifer, Fleischer, Robert C.
Publié 2002

Defective HIV-1 proviruses produce novel protein-coding RNA species in HIV-infected patients on combination antiretroviral therapy

par Imamichi, Hiromi, Dewar, Robin L., Adelsberger, Joseph W., Rehm, Catherine A., O’Doherty, Una, Paxinos, Ellen E., Fauci, Anthony S., Lane, H. Clifford
Publié dans Proc Natl Acad Sci U S A (2016)

Cerebrospinal fluid HIV infection and pleocytosis: Relation to systemic infection and antiretroviral treatment

par Spudich, Serena S, Nilsson, Annelie C, Lollo, Nicole D, Liegler, Teri J, Petropoulos, Christos J, Deeks, Steven G, Paxinos, Ellen E, Price, Richard W
Publié 2005

Whole-Genome Sequences of Burkholderia pseudomallei Isolates Exhibiting Decreased Meropenem Susceptibility

par Price, Erin P., Smith, Melissa Laird, Paxinos, Ellen E., Tallon, Luke J., Sadzewicz, Lisa, Sengamalay, Naomi, Baird, Robert W., Currie, Bart J., Sarovich, Derek S.
Publié dans Genome Announc (2017)

Development and Characterization of a Novel Single-Cycle Recombinant-Virus Assay To Determine Human Immunodeficiency Virus Type 1 Coreceptor Tropism

par Whitcomb, Jeannette M., Huang, Wei, Fransen, Signe, Limoli, Kay, Toma, Jonathan, Wrin, Terri, Chappey, Colombe, Kiss, Linda D. B., Paxinos, Ellen E., Petropoulos, Christos J.
Publié 2007

Multicenter Comparison Study of both Analytical and Clinical Performance across Four Roche Hepatitis C Virus RNA Assays Utilizing Different Platforms

par Vermehren, Johannes, Stelzl, Evelyn, Maasoumy, Benjamin, Michel-Treil, Veronique, Berkowski, Caterina, Marins, Ed G., Paxinos, Ellen E., Marino, Enrique, Wedemeyer, Heiner, Sarrazin, Christoph, Kessler, Harald H.
Publié dans J Clin Microbiol (2017)

Comparative Genomics Reveals the Diversity of Restriction-Modification Systems and DNA Methylation Sites in Listeria monocytogenes

par Chen, Poyin, den Bakker, Henk C., Korlach, Jonas, Kong, Nguyet, Storey, Dylan B., Paxinos, Ellen E., Ashby, Meredith, Clark, Tyson, Luong, Khai, Wiedmann, Martin, Weimer, Bart C.
Publié dans Appl Environ Microbiol (2017)

Mutation D30N Is Not Preferentially Selected by Human Immunodeficiency Virus Type 1 Subtype C in the Development of Resistance to Nelfinavir

par Grossman, Zehava, Paxinos, Ellen E., Averbuch, Diana, Maayan, Shlomo, Parkin, Neil T., Engelhard, Dan, Lorber, Margalit, Istomin, Valery, Shaked, Yael, Mendelson, Ella, Ram, Daniela, Petropoulos, Chris J., Schapiro, Jonathan M.
Publié 2004

Multiplexed highly-accurate DNA sequencing of closely-related HIV-1 variants using continuous long reads from single molecule, real-time sequencing

par Dilernia, Dario A., Chien, Jung-Ting, Monaco, Daniela C., Brown, Michael P.S., Ende, Zachary, Deymier, Martin J., Yue, Ling, Paxinos, Ellen E., Allen, Susan, Tirado-Ramos, Alfredo, Hunter, Eric
Publié dans Nucleic Acids Res (2015)

Coreceptor Tropism in Human Immunodeficiency Virus Type 1 Subtype D: High Prevalence of CXCR4 Tropism and Heterogeneous Composition of Viral Populations

par Huang, Wei, Eshleman, Susan H., Toma, Jonathan, Fransen, Signe, Stawiski, Eric, Paxinos, Ellen E., Whitcomb, Jeannette M., Young, Alicia M., Donnell, Deborah, Mmiro, Francis, Musoke, Philippa, Guay, Laura A., Jackson, J. Brooks, Parkin, Neil T., Petropoulos, Christos J.
Publié 2007

Discovery of a divergent HPIV4 from respiratory secretions using second and third generation metagenomic sequencing

par Alquezar-Planas, David E., Mourier, Tobias, Bruhn, Christian A. W., Hansen, Anders J., Vitcetz, Sarah Nathalie, Mørk, Søren, Gorodkin, Jan, Nielsen, Hanne Abel, Guo, Yan, Sethuraman, Anand, Paxinos, Ellen E., Shan, Tongling, Delwart, Eric L., Nielsen, Lars P.
Publié 2013

Rapid Sequencing of Complete env Genes from Primary HIV-1 Samples

par Laird Smith, Melissa, Murrell, Ben, Eren, Kemal, Ignacio, Caroline, Landais, Elise, Weaver, Steven, Phung, Pham, Ludka, Colleen, Hepler, Lance, Caballero, Gemma, Pollner, Tristan, Guo, Yan, Richman, Douglas, Poignard, Pascal, Paxinos, Ellen E., Kosakovsky Pond, Sergei L., Smith, Davey M.
Publié dans Virus Evol (2016)

The Origin of the Haitian Cholera Outbreak Strain

par Chin, Chen-Shan, Sorenson, Jon, Harris, Jason B., Robins, William P., Charles, Richelle C., Jean-Charles, Roger R., Bullard, James, Webster, Dale R., Kasarskis, Andrew, Peluso, Paul, Paxinos, Ellen E., Yamaichi, Yoshiharu, Calderwood, Stephen B., Mekalanos, John J., Schadt, Eric E., Waldor, Matthew K.
Publié 2010

Evolutionary Dynamics of Vibrio cholerae O1 following a Single-Source Introduction to Haiti

par Katz, Lee S., Petkau, Aaron, Beaulaurier, John, Tyler, Shaun, Antonova, Elena S., Turnsek, Maryann A., Guo, Yan, Wang, Susana, Paxinos, Ellen E., Orata, Fabini, Gladney, Lori M., Stroika, Steven, Folster, Jason P., Rowe, Lori, Freeman, Molly M., Knox, Natalie, Frace, Mike, Boncy, Jacques, Graham, Morag, Hammer, Brian K., Boucher, Yan, Bashir, Ali, Hanage, William P., Van Domselaar, Gary, Tarr, Cheryl L.
Publié 2013

Origins of the E. coli Strain Causing an Outbreak of Hemolytic–Uremic Syndrome in Germany

par Rasko, David A., Webster, Dale R., Sahl, Jason W., Bashir, Ali, Boisen, Nadia, Scheutz, Flemming, Paxinos, Ellen E., Sebra, Robert, Chin, Chen-Shan, Iliopoulos, Dimitris, Klammer, Aaron, Peluso, Paul, Lee, Lawrence, Kislyuk, Andrey O., Bullard, James, Kasarskis, Andrew, Wang, Susanna, Eid, John, Rank, David, Redman, Julia C., Steyert, Susan R., Frimodt-Møller, Jakob, Struve, Carsten, Petersen, Andreas M., Krogfelt, Karen A., Nataro, James P., Schadt, Eric E., Waldor, Matthew K.
Publié 2011

Assembly and diploid architecture of an individual human genome via single-molecule technologies

par Pendleton, Matthew, Sebra, Robert, Pang, Andy Wing Chun, Ummat, Ajay, Franzen, Oscar, Rausch, Tobias, Stütz, Adrian M, Stedman, William, Anantharaman, Thomas, Hastie, Alex, Dai, Heng, Fritz, Markus Hsi-Yang, Cao, Han, Cohain, Ariella, Deikus, Gintaras, Durrett, Russell E, Blanchard, Scott C, Altman, Roger, Chin, Chen-Shan, Guo, Yan, Paxinos, Ellen E, Korbel, Jan O, Darnell, Robert B, McCombie, W Richard, Kwok, Pui-Yan, Mason, Christopher E, Schadt, Eric E, Bashir, Ali
Publié dans Nat Methods (2015)