CIRCUS: a package for Circos display of structural genome variations from paired-end and mate-pair sequencing data

Bằng Naquin, Delphine, d’Aubenton-Carafa, Yves, Thermes, Claude, Silvain, Maud
Được phát hành 2014

First Complete Genome Sequence of a Salmonella enterica subsp. enterica Serovar Derby Strain Associated with Pork in France

Bằng Kérouanton, Annaëlle, Hirchaud, Edouard, Rose, Valérie, Esnault, Emilie, Naquin, Delphine, Denis, Martine
Xuất bản năm Genome Announc (2015)

Complete Sequence of the Intronless Mitochondrial Genome of the Saccharomyces cerevisiae Strain CW252

Bằng Naquin, Delphine, Panozzo, Cristina, Dujardin, Geneviève, van Dijk, Erwin, d’Aubenton-Carafa, Yves, Thermes, Claude
Xuất bản năm Genome Announc (2018)

Systematic comparison of small RNA library preparation protocols for next-generation sequencing

Bằng Dard-Dascot, Cloelia, Naquin, Delphine, d’Aubenton-Carafa, Yves, Alix, Karine, Thermes, Claude, van Dijk, Erwin
Xuất bản năm BMC Genomics (2018)

Unraveling the Stratification of an Iron-Oxidizing Microbial Mat by Metatranscriptomics

Bằng Quaiser, Achim, Bodi, Xavier, Dufresne, Alexis, Naquin, Delphine, Francez, André-Jean, Dheilly, Alexandra, Coudouel, Sophie, Pedrot, Mathieu, Vandenkoornhuyse, Philippe
Được phát hành 2014

Massive Gene Flux Drives Genome Diversity between Sympatric Streptomyces Conspecifics

Bằng Tidjani, Abdoul-Razak, Lorenzi, Jean-Noël, Toussaint, Maxime, van Dijk, Erwin, Naquin, Delphine, Lespinet, Olivier, Bontemps, Cyril, Leblond, Pierre
Xuất bản năm mBio (2019)

Genome Sequences of 11 Conspecific Streptomyces sp. Strains

Bằng Tidjani, Abdoul-Razak, Lorenzi, Jean-Noël, Toussaint, Maxime, van Dijk, Erwin, Naquin, Delphine, Lespinet, Olivier, Bontemps, Cyril, Leblond, Pierre
Xuất bản năm Microbiol Resour Announc (2019)

Impact of the severity of negative energy balance on gene expression in the subcutaneous adipose tissue of periparturient primiparous Holstein dairy cows: Identification of potenti...

Bằng Mellouk, Namya, Rame, Christelle, Naquin, Delphine, Jaszczyszyn, Yan, Touzé, Jean-Luc, Briant, Eric, Guillaume, Daniel, Ntallaris, Theodoros, Humblot, Patrice, Dupont, Joëlle
Xuất bản năm PLoS One (2019)

The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolutio...

Bằng Martin, Guillaume E., Rousseau-Gueutin, Mathieu, Cordonnier, Solenn, Lima, Oscar, Michon-Coudouel, Sophie, Naquin, Delphine, de Carvalho, Julie Ferreira, Aïnouche, Malika, Salmon, Armel, Aïnouche, Abdelkader
Được phát hành 2014

Genome Sequence of Lactococcus lactis subsp. lactis bv. diacetylactis LD61

Bằng Falentin, Hélène, Naquin, Delphine, Loux, Valentin, Barloy-Hubler, Frédérique, Loubière, Pascal, Nouaille, Sébastien, Lavenier, Dominique, Le Bourgeois, Pascal, François, Patrice, Schrenzel, Jacques, Hernandez, David, Even, Sergine, Le Loir, Yves
Được phát hành 2014

Suppression of Dwarf and irregular xylem Phenotypes Generates Low-Acetylated Biomass Lines in Arabidopsis

Bằng Bensussan, Matthieu, Lefebvre, Valérie, Ducamp, Aloïse, Trouverie, Jacques, Gineau, Emilie, Fortabat, Marie-Noëlle, Guillebaux, Alexia, Baldy, Aurélie, Naquin, Delphine, Herbette, Stéphane, Lapierre, Catherine, Mouille, Gregory, Horlow, Christine, Durand-Tardif, Mylène
Xuất bản năm Plant Physiol (2015)

Contrasting Gene Decay in Subterranean Vertebrates: Insights from Cavefishes and Fossorial Mammals

Bằng Policarpo, Maxime, Fumey, Julien, Lafargeas, Philippe, Naquin, Delphine, Thermes, Claude, Naville, Magali, Dechaud, Corentin, Volff, Jean-Nicolas, Cabau, Cedric, Klopp, Christophe, Møller, Peter Rask, Bernatchez, Louis, García-Machado, Erik, Rétaux, Sylvie, Casane, Didier
Xuất bản năm Mol Biol Evol (2020)

Assemblathon 1: A competitive assessment of de novo short read assembly methods

Bằng Earl, Dent, Bradnam, Keith, St. John, John, Darling, Aaron, Lin, Dawei, Fass, Joseph, Yu, Hung On Ken, Buffalo, Vince, Zerbino, Daniel R., Diekhans, Mark, Nguyen, Ngan, Ariyaratne, Pramila Nuwantha, Sung, Wing-Kin, Ning, Zemin, Haimel, Matthias, Simpson, Jared T., Fonseca, Nuno A., Birol, İnanç, Docking, T. Roderick, Ho, Isaac Y., Rokhsar, Daniel S., Chikhi, Rayan, Lavenier, Dominique, Chapuis, Guillaume, Naquin, Delphine, Maillet, Nicolas, Schatz, Michael C., Kelley, David R., Phillippy, Adam M., Koren, Sergey, Yang, Shiaw-Pyng, Wu, Wei, Chou, Wen-Chi, Srivastava, Anuj, Shaw, Timothy I., Ruby, J. Graham, Skewes-Cox, Peter, Betegon, Miguel, Dimon, Michelle T., Solovyev, Victor, Seledtsov, Igor, Kosarev, Petr, Vorobyev, Denis, Ramirez-Gonzalez, Ricardo, Leggett, Richard, MacLean, Dan, Xia, Fangfang, Luo, Ruibang, Li, Zhenyu, Xie, Yinlong, Liu, Binghang, Gnerre, Sante, MacCallum, Iain, Przybylski, Dariusz, Ribeiro, Filipe J., Yin, Shuangye, Sharpe, Ted, Hall, Giles, Kersey, Paul J., Durbin, Richard, Jackman, Shaun D., Chapman, Jarrod A., Huang, Xiaoqiu, DeRisi, Joseph L., Caccamo, Mario, Li, Yingrui, Jaffe, David B., Green, Richard E., Haussler, David, Korf, Ian, Paten, Benedict
Được phát hành 2011

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

Bằng Bradnam, Keith R, Fass, Joseph N, Alexandrov, Anton, Baranay, Paul, Bechner, Michael, Birol, Inanç, Boisvert, Sébastien, Chapman, Jarrod A, Chapuis, Guillaume, Chikhi, Rayan, Chitsaz, Hamidreza, Chou, Wen-Chi, Corbeil, Jacques, Del Fabbro, Cristian, Docking, T Roderick, Durbin, Richard, Earl, Dent, Emrich, Scott, Fedotov, Pavel, Fonseca, Nuno A, Ganapathy, Ganeshkumar, Gibbs, Richard A, Gnerre, Sante, Godzaridis, Élénie, Goldstein, Steve, Haimel, Matthias, Hall, Giles, Haussler, David, Hiatt, Joseph B, Ho, Isaac Y, Howard, Jason, Hunt, Martin, Jackman, Shaun D, Jaffe, David B, Jarvis, Erich D, Jiang, Huaiyang, Kazakov, Sergey, Kersey, Paul J, Kitzman, Jacob O, Knight, James R, Koren, Sergey, Lam, Tak-Wah, Lavenier, Dominique, Laviolette, François, Li, Yingrui, Li, Zhenyu, Liu, Binghang, Liu, Yue, Luo, Ruibang, MacCallum, Iain, MacManes, Matthew D, Maillet, Nicolas, Melnikov, Sergey, Naquin, Delphine, Ning, Zemin, Otto, Thomas D, Paten, Benedict, Paulo, Octávio S, Phillippy, Adam M, Pina-Martins, Francisco, Place, Michael, Przybylski, Dariusz, Qin, Xiang, Qu, Carson, Ribeiro, Filipe J, Richards, Stephen, Rokhsar, Daniel S, Ruby, J Graham, Scalabrin, Simone, Schatz, Michael C, Schwartz, David C, Sergushichev, Alexey, Sharpe, Ted, Shaw, Timothy I, Shendure, Jay, Shi, Yujian, Simpson, Jared T, Song, Henry, Tsarev, Fedor, Vezzi, Francesco, Vicedomini, Riccardo, Vieira, Bruno M, Wang, Jun, Worley, Kim C, Yin, Shuangye, Yiu, Siu-Ming, Yuan, Jianying, Zhang, Guojie, Zhang, Hao, Zhou, Shiguo, Korf, Ian F
Được phát hành 2013