Scalable Genomics with R and Bioconductor

Por Lawrence, Michael, Morgan, Martin
Publicado no Stat Sci (2014)

Explaining phenotypic selection on plant attractive characters: male function, gender balance or ecological context?

Por Ashman, Tia-Lynn, Morgan, Martin T.
Publicado em 2004

The Bioconductor channel in F1000Research

Por Huber, Wolfgang, Carey, Vincent, Davis, Sean, Hansen, Kasper Daniel, Morgan, Martin
Publicado no F1000Res (2016)

ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

Por Morgan, Martin, Anders, Simon, Lawrence, Michael, Aboyoun, Patrick, Pagès, Hervé, Gentleman, Robert
Publicado em 2009

VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants

Por Obenchain, Valerie, Lawrence, Michael, Carey, Vincent, Gogarten, Stephanie, Shannon, Paul, Morgan, Martin
Publicado em 2014

Genomic Differences Between Estrogen Receptor (ER)-Positive and ER-Negative Human Breast Carcinoma Identified by Single Nucleotide Polymorphism Array Comparative Genome Hybridizati...

Por Fang, Min, Toher, Jessica, Morgan, Martin, Davison, Jerry, Tannenbaum, Susan, Claffey, Kevin
Publicado no Cancer (2010)

Recent Genetic Selection in the Ancestral Admixture of Puerto Ricans

Por Tang, Hua , Choudhry, Shweta , Mei, Rui , Morgan, Martin , Rodriguez-Cintron, William , Burchard, Esteban González , Risch, Neil J. 
Publicado em 2007

Response to Price et al.

Por Tang, Hua, Choudhry, Shweta, Mei, Rui, Morgan, Martin, Rodriguez-Cintron, William, Burchard, Esteban Gonzalez, Risch, Neil J.
Publicado em 2008

Software for Computing and Annotating Genomic Ranges

Por Lawrence, Michael, Huber, Wolfgang, Pagès, Hervé, Aboyoun, Patrick, Carlson, Marc, Gentleman, Robert, Morgan, Martin T., Carey, Vincent J.
Publicado em 2013

Metabolic Signatures of Bacterial Vaginosis

Por Srinivasan, Sujatha, Morgan, Martin T., Fiedler, Tina L., Djukovic, Danijel, Hoffman, Noah G., Raftery, Daniel, Marrazzo, Jeanne M., Fredricks, David N.
Publicado no mBio (2015)

MYC-driven tumorigenesis is inhibited by WRN syndrome gene deficiency

Por Moser, Russell, Toyoshima, Masafumi, Robinson, Kristin, Gurley, Kay E., Howie, Heather L., Davison, Jerry, Morgan, Martin, Kemp, Christopher J., Grandori, Carla
Publicado em 2012

More Than Meets the Eye: Associations of Vaginal Bacteria with Gram Stain Morphotypes Using Molecular Phylogenetic Analysis

Por Srinivasan, Sujatha, Morgan, Martin T., Liu, Congzhou, Matsen, Frederick A., Hoffman, Noah G., Fiedler, Tina L., Agnew, Kathy J., Marrazzo, Jeanne M., Fredricks, David N.
Publicado em 2013

Relationship of Specific Bacteria in the Cervical and Vaginal Microbiotas with Cervicitis

Por Gorgos, Linda M., Sycuro, Laura K., Srinivasan, Sujatha, Fiedler, Tina L., Morgan, Martin T., Balkus, Jennifer E., McClelland, R. Scott, Fredricks, David N., Marrazzo, Jeanne M.
Publicado no Sex Transm Dis (2015)

Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming

Por Cao, Yi, Yao, Zizhen, Sarkar, Deepayan, Lawrence, Michael, Sanchez, Gilson J., Parker, Maura H., MacQuarrie, Kyle L., Davison, Jerry, Morgan, Martin T., Ruzzo, Walter L., Gentleman, Robert C., Tapscott, Stephen J.
Publicado em 2010

Bacterial Communities in Women with Bacterial Vaginosis: High Resolution Phylogenetic Analyses Reveal Relationships of Microbiota to Clinical Criteria

Por Srinivasan, Sujatha, Hoffman, Noah G., Morgan, Martin T., Matsen, Frederick A., Fiedler, Tina L., Hall, Robert W., Ross, Frederick J., McCoy, Connor O., Bumgarner, Roger, Marrazzo, Jeanne M., Fredricks, David N.
Publicado em 2012

Public data and open source tools for multi-assay genomic investigation of disease

Por Kannan, Lavanya, Ramos, Marcel, Re, Angela, El-Hachem, Nehme, Safikhani, Zhaleh, Gendoo, Deena M.A., Davis, Sean, Gomez-Cabrero, David, Castelo, Robert, Hansen, Kasper D., Carey, Vincent J., Morgan, Martin, Culhane, Aedín C., Haibe-Kains, Benjamin, Waldron, Levi
Publicado no Brief Bioinform (2016)

Gene expression changes in adipose tissue with diet- and/or exercise-induced weight loss

Por Campbell, Kristin L., Foster-Schubert, Karen E., Makar, Karen W., Kratz, Mario, Hagman, Derek, Schur, Ellen A., Habermann, Nina, Horton, Marc, Abbenhardt, Clare, Kuan, Ling-Yu, Xiao, Liren, Davison, Jerry, Morgan, Martin, Wang, Ching-Yun, Duggan, Catherine, McTiernan, Anne, Ulrich, Cornelia M.
Publicado em 2013

Orchestrating high-throughput genomic analysis with Bioconductor

Por Huber, Wolfgang, Carey, Vincent J., Gentleman, Robert, Anders, Simon, Carlson, Marc, Carvalho, Benilton S., Bravo, Hector Corrada, Davis, Sean, Gatto, Laurent, Girke, Thomas, Gottardo, Raphael, Hahne, Florian, Hansen, Kasper D., Irizarry, Rafael A., Lawrence, Michael, Love, Michael I., MacDonald, James, Obenchain, Valerie, Oleś, Andrzej K., Pagès, Hervé, Reyes, Alejandro, Shannon, Paul, Smyth, Gordon K., Tenenbaum, Dan, Waldron, Levi, Morgan, Martin
Publicado no Nat Methods (2015)