Robust DNA Isolation and High-throughput Sequencing Library Construction for Herbarium Specimens

von Saeidi, Saman, McKain, Michael R., Kellogg, Elizabeth A.
Veröffentlicht in J Vis Exp (2018)

Evolutionary Dynamics of Transposable Elements Following a Shared Polyploidization Event in the Tribe Andropogoneae

von Ramachandran, Dhanushya, McKain, Michael R., Kellogg, Elizabeth A., Hawkins, Jennifer S.
Veröffentlicht in G3 (Bethesda) (2020)

Verdant: automated annotation, alignment and phylogenetic analysis of whole chloroplast genomes

von McKain, Michael R, Hartsock, Ryan H, Wohl, Molly M, Kellogg, Elizabeth A
Veröffentlicht in Bioinformatics (2017)

Practical considerations for plant phylogenomics

von McKain, Michael R., Johnson, Matthew G., Uribe‐Convers, Simon, Eaton, Deren, Yang, Ya
Veröffentlicht in Appl Plant Sci (2018)

Specimen-based analysis of morphology and the environment in ecologically dominant grasses: the power of the herbarium

von McAllister, Christine A., McKain, Michael R., Li, Mao, Bookout, Bess, Kellogg, Elizabeth A.
Veröffentlicht in Philos Trans R Soc Lond B Biol Sci (2019)

Drosophila melanogaster retrotransposon and inverted repeat-derived endogenous siRNAs are differentially processed in distinct cellular locations

von Harrington, Andrew W., McKain, Michael R., Michalski, Daniel, Bauer, Kaylyn M., Daugherty, Joshua M., Steiniger, Mindy
Veröffentlicht in BMC Genomics (2017)

Reply to: Revisiting the origin of octoploid strawberry

von Edger, Patrick P., McKain, Michael R., Yocca, Alan E., Knapp, Steven J., Qiao, Qin, Zhang, Ticao
Veröffentlicht in Nat Genet (2019)

Ancient Polyploidy and Genome Evolution in Palms

von Barrett, Craig F, McKain, Michael R, Sinn, Brandon T, Ge, Xue-Jun, Zhang, Yuqu, Antonelli, Alexandre, Bacon, Christine D
Veröffentlicht in Genome Biol Evol (2019)

Hybridization History and Repetitive Element Content in the Genome of a Homoploid Hybrid, Yucca gloriosa (Asparagaceae)

von Heyduk, Karolina, McAssey, Edward V., Grimwood, Jane, Shu, Shengqiang, Schmutz, Jeremy, McKain, Michael R., Leebens-Mack, Jim
Veröffentlicht in Front Plant Sci (2021)

The draft genome of the C(3) panicoid grass species Dichanthelium oligosanthes

von Studer, Anthony J., Schnable, James C., Weissmann, Sarit, Kolbe, Allison R., McKain, Michael R., Shao, Ying, Cousins, Asaph B., Kellogg, Elizabeth A., Brutnell, Thomas P.
Veröffentlicht in Genome Biol (2016)

Allopolyploidy, diversification, and the Miocene grassland expansion

von Estep, Matt C., McKain, Michael R., Vela Diaz, Dilys, Zhong, Jinshun, Hodge, John G., Hodkinson, Trevor R., Layton, Daniel J., Malcomber, Simon T., Pasquet, Rémy, Kellogg, Elizabeth A.
Veröffentlicht 2014

A Phylogenomic Assessment of Ancient Polyploidy and Genome Evolution across the Poales

von McKain, Michael R., Tang, Haibao, McNeal, Joel R., Ayyampalayam, Saravanaraj, Davis, Jerrold I., dePamphilis, Claude W., Givnish, Thomas J., Pires, J. Chris, Stevenson, Dennis Wm., Leebens-Mack, James H.
Veröffentlicht in Genome Biol Evol (2016)

Chromosome-Scale Genome for a Red-Fruited, Perpetual Flowering and Runnerless Woodland Strawberry (Fragaria vesca)

von Alger, Elizabeth I., Platts, Adrian E., Deb, Sontosh K., Luo, Xi, Ou, Shujun, Cao, Yao, Hummer, Kim E., Xiong, Zhiyong, Knapp, Steven J., Liu, Zhongchi, McKain, Michael R., Edger, Patrick P.
Veröffentlicht in Front Genet (2021)

Continued Adaptation of C(4) Photosynthesis After an Initial Burst of Changes in the Andropogoneae Grasses

von Bianconi, Matheus E, Hackel, Jan, Vorontsova, Maria S, Alberti, Adriana, Arthan, Watchara, Burke, Sean V, Duvall, Melvin R, Kellogg, Elizabeth A, Lavergne, Sébastien, McKain, Michael R, Meunier, Alexandre, Osborne, Colin P, Traiperm, Paweena, Christin, Pascal-Antoine, Besnard, Guillaume
Veröffentlicht in Syst Biol (2020)

Phylogeny and multiple independent whole‐genome duplication events in the Brassicales

von Mabry, Makenzie E., Brose, Julia M., Blischak, Paul D., Sutherland, Brittany, Dismukes, Wade T., Bottoms, Christopher A., Edger, Patrick P., Washburn, Jacob D., An, Hong, Hall, Jocelyn C., McKain, Michael R., Al‐Shehbaz, Ihsan, Barker, Michael S., Schranz, M. Eric, Conant, Gavin C., Pires, J. Chris
Veröffentlicht in Am J Bot (2020)

Multiple Polyploidy Events in the Early Radiation of Nodulating and Nonnodulating Legumes

von Cannon, Steven B., McKain, Michael R., Harkess, Alex, Nelson, Matthew N., Dash, Sudhansu, Deyholos, Michael K., Peng, Yanhui, Joyce, Blake, Stewart, Charles N., Rolf, Megan, Kutchan, Toni, Tan, Xuemei, Chen, Cui, Zhang, Yong, Carpenter, Eric, Wong, Gane Ka-Shu, Doyle, Jeff J., Leebens-Mack, Jim
Veröffentlicht in Mol Biol Evol (2015)

Subgenome Dominance in an Interspecific Hybrid, Synthetic Allopolyploid, and a 140-Year-Old Naturally Established Neo-Allopolyploid Monkeyflower

von Edger, Patrick P., Smith, Ronald, McKain, Michael R., Cooley, Arielle M., Vallejo-Marin, Mario, Yuan, Yaowu, Bewick, Adam J., Ji, Lexiang, Platts, Adrian E., Bowman, Megan J., Childs, Kevin L., Washburn, Jacob D., Schmitz, Robert J., Smith, Gregory D., Pires, J. Chris, Puzey, Joshua R.
Veröffentlicht in Plant Cell (2017)

Elucidating steroid alkaloid biosynthesis in Veratrum californicum: production of verazine in Sf9 cells

von Augustin, Megan M., Ruzicka, Dan R., Shukla, Ashutosh K., Augustin, Jörg M., Starks, Courtney M., O’Neil-Johnson, Mark, McKain, Michael R., Evans, Bradley S., Barrett, Matt D., Smithson, Ann, Wong, Gane Ka-Shu, Deyholos, Michael K., Edger, Patrick P., Pires, J. Chris, Leebens-Mack, James H., Mann, David A., Kutchan, Toni M.
Veröffentlicht in Plant J (2015)

Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity

von Edger, Patrick P, VanBuren, Robert, Colle, Marivi, Poorten, Thomas J, Wai, Ching Man, Niederhuth, Chad E, Alger, Elizabeth I, Ou, Shujun, Acharya, Charlotte B, Wang, Jie, Callow, Pete, McKain, Michael R, Shi, Jinghua, Collier, Chad, Xiong, Zhiyong, Mower, Jeffrey P, Slovin, Janet P, Hytönen, Timo, Jiang, Ning, Childs, Kevin L, Knapp, Steven J
Veröffentlicht in Gigascience (2017)

A genome triplication associated with early diversification of the core eudicots

von Jiao, Yuannian, Leebens-Mack, Jim, Ayyampalayam, Saravanaraj, Bowers, John E, McKain, Michael R, McNeal, Joel, Rolf, Megan, Ruzicka, Daniel R, Wafula, Eric, Wickett, Norman J, Wu, Xiaolei, Zhang, Yong, Wang, Jun, Zhang, Yeting, Carpenter, Eric J, Deyholos, Michael K, Kutchan, Toni M, Chanderbali, Andre S, Soltis, Pamela S, Stevenson, Dennis W, McCombie, Richard, Pires, J Chris, Wong, Gane Ka-Shu, Soltis, Douglas E, dePamphilis, Claude W
Veröffentlicht 2012