Robust DNA Isolation and High-throughput Sequencing Library Construction for Herbarium Specimens

Por Saeidi, Saman, McKain, Michael R., Kellogg, Elizabeth A.
Publicado no J Vis Exp (2018)

Evolutionary Dynamics of Transposable Elements Following a Shared Polyploidization Event in the Tribe Andropogoneae

Por Ramachandran, Dhanushya, McKain, Michael R., Kellogg, Elizabeth A., Hawkins, Jennifer S.
Publicado no G3 (Bethesda) (2020)

Verdant: automated annotation, alignment and phylogenetic analysis of whole chloroplast genomes

Por McKain, Michael R, Hartsock, Ryan H, Wohl, Molly M, Kellogg, Elizabeth A
Publicado no Bioinformatics (2017)

Practical considerations for plant phylogenomics

Por McKain, Michael R., Johnson, Matthew G., Uribe‐Convers, Simon, Eaton, Deren, Yang, Ya
Publicado no Appl Plant Sci (2018)

Specimen-based analysis of morphology and the environment in ecologically dominant grasses: the power of the herbarium

Por McAllister, Christine A., McKain, Michael R., Li, Mao, Bookout, Bess, Kellogg, Elizabeth A.
Publicado no Philos Trans R Soc Lond B Biol Sci (2019)

Drosophila melanogaster retrotransposon and inverted repeat-derived endogenous siRNAs are differentially processed in distinct cellular locations

Por Harrington, Andrew W., McKain, Michael R., Michalski, Daniel, Bauer, Kaylyn M., Daugherty, Joshua M., Steiniger, Mindy
Publicado no BMC Genomics (2017)

Reply to: Revisiting the origin of octoploid strawberry

Por Edger, Patrick P., McKain, Michael R., Yocca, Alan E., Knapp, Steven J., Qiao, Qin, Zhang, Ticao
Publicado no Nat Genet (2019)

Ancient Polyploidy and Genome Evolution in Palms

Por Barrett, Craig F, McKain, Michael R, Sinn, Brandon T, Ge, Xue-Jun, Zhang, Yuqu, Antonelli, Alexandre, Bacon, Christine D
Publicado no Genome Biol Evol (2019)

Hybridization History and Repetitive Element Content in the Genome of a Homoploid Hybrid, Yucca gloriosa (Asparagaceae)

Por Heyduk, Karolina, McAssey, Edward V., Grimwood, Jane, Shu, Shengqiang, Schmutz, Jeremy, McKain, Michael R., Leebens-Mack, Jim
Publicado no Front Plant Sci (2021)

The draft genome of the C(3) panicoid grass species Dichanthelium oligosanthes

Por Studer, Anthony J., Schnable, James C., Weissmann, Sarit, Kolbe, Allison R., McKain, Michael R., Shao, Ying, Cousins, Asaph B., Kellogg, Elizabeth A., Brutnell, Thomas P.
Publicado no Genome Biol (2016)

Allopolyploidy, diversification, and the Miocene grassland expansion

Por Estep, Matt C., McKain, Michael R., Vela Diaz, Dilys, Zhong, Jinshun, Hodge, John G., Hodkinson, Trevor R., Layton, Daniel J., Malcomber, Simon T., Pasquet, Rémy, Kellogg, Elizabeth A.
Publicado em 2014

A Phylogenomic Assessment of Ancient Polyploidy and Genome Evolution across the Poales

Por McKain, Michael R., Tang, Haibao, McNeal, Joel R., Ayyampalayam, Saravanaraj, Davis, Jerrold I., dePamphilis, Claude W., Givnish, Thomas J., Pires, J. Chris, Stevenson, Dennis Wm., Leebens-Mack, James H.
Publicado no Genome Biol Evol (2016)

Continued Adaptation of C(4) Photosynthesis After an Initial Burst of Changes in the Andropogoneae Grasses

Por Bianconi, Matheus E, Hackel, Jan, Vorontsova, Maria S, Alberti, Adriana, Arthan, Watchara, Burke, Sean V, Duvall, Melvin R, Kellogg, Elizabeth A, Lavergne, Sébastien, McKain, Michael R, Meunier, Alexandre, Osborne, Colin P, Traiperm, Paweena, Christin, Pascal-Antoine, Besnard, Guillaume
Publicado no Syst Biol (2020)

Phylogeny and multiple independent whole‐genome duplication events in the Brassicales

Por Mabry, Makenzie E., Brose, Julia M., Blischak, Paul D., Sutherland, Brittany, Dismukes, Wade T., Bottoms, Christopher A., Edger, Patrick P., Washburn, Jacob D., An, Hong, Hall, Jocelyn C., McKain, Michael R., Al‐Shehbaz, Ihsan, Barker, Michael S., Schranz, M. Eric, Conant, Gavin C., Pires, J. Chris
Publicado no Am J Bot (2020)

Multiple Polyploidy Events in the Early Radiation of Nodulating and Nonnodulating Legumes

Por Cannon, Steven B., McKain, Michael R., Harkess, Alex, Nelson, Matthew N., Dash, Sudhansu, Deyholos, Michael K., Peng, Yanhui, Joyce, Blake, Stewart, Charles N., Rolf, Megan, Kutchan, Toni, Tan, Xuemei, Chen, Cui, Zhang, Yong, Carpenter, Eric, Wong, Gane Ka-Shu, Doyle, Jeff J., Leebens-Mack, Jim
Publicado no Mol Biol Evol (2015)

Subgenome Dominance in an Interspecific Hybrid, Synthetic Allopolyploid, and a 140-Year-Old Naturally Established Neo-Allopolyploid Monkeyflower

Por Edger, Patrick P., Smith, Ronald, McKain, Michael R., Cooley, Arielle M., Vallejo-Marin, Mario, Yuan, Yaowu, Bewick, Adam J., Ji, Lexiang, Platts, Adrian E., Bowman, Megan J., Childs, Kevin L., Washburn, Jacob D., Schmitz, Robert J., Smith, Gregory D., Pires, J. Chris, Puzey, Joshua R.
Publicado no Plant Cell (2017)

Elucidating steroid alkaloid biosynthesis in Veratrum californicum: production of verazine in Sf9 cells

Por Augustin, Megan M., Ruzicka, Dan R., Shukla, Ashutosh K., Augustin, Jörg M., Starks, Courtney M., O’Neil-Johnson, Mark, McKain, Michael R., Evans, Bradley S., Barrett, Matt D., Smithson, Ann, Wong, Gane Ka-Shu, Deyholos, Michael K., Edger, Patrick P., Pires, J. Chris, Leebens-Mack, James H., Mann, David A., Kutchan, Toni M.
Publicado no Plant J (2015)

Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity

Por Edger, Patrick P, VanBuren, Robert, Colle, Marivi, Poorten, Thomas J, Wai, Ching Man, Niederhuth, Chad E, Alger, Elizabeth I, Ou, Shujun, Acharya, Charlotte B, Wang, Jie, Callow, Pete, McKain, Michael R, Shi, Jinghua, Collier, Chad, Xiong, Zhiyong, Mower, Jeffrey P, Slovin, Janet P, Hytönen, Timo, Jiang, Ning, Childs, Kevin L, Knapp, Steven J
Publicado no Gigascience (2017)

A genome triplication associated with early diversification of the core eudicots

Por Jiao, Yuannian, Leebens-Mack, Jim, Ayyampalayam, Saravanaraj, Bowers, John E, McKain, Michael R, McNeal, Joel, Rolf, Megan, Ruzicka, Daniel R, Wafula, Eric, Wickett, Norman J, Wu, Xiaolei, Zhang, Yong, Wang, Jun, Zhang, Yeting, Carpenter, Eric J, Deyholos, Michael K, Kutchan, Toni M, Chanderbali, Andre S, Soltis, Pamela S, Stevenson, Dennis W, McCombie, Richard, Pires, J Chris, Wong, Gane Ka-Shu, Soltis, Douglas E, dePamphilis, Claude W
Publicado em 2012

Origin and evolution of the octoploid strawberry genome

Por Edger, Patrick P., Poorten, Thomas J., VanBuren, Robert, Hardigan, Michael A., Colle, Marivi, McKain, Michael R., Smith, Ronald D., Teresi, Scott J., Nelson, Andrew D. L., Wai, Ching Man, Alger, Elizabeth I., Bird, Kevin A., Yocca, Alan E., Pumplin, Nathan, Ou, Shujun, Ben-Zvi, Gil, Brodt, Avital, Baruch, Kobi, Swale, Thomas, Shiue, Lily, Acharya, Charlotte B., Cole, Glenn S., Mower, Jeffrey P., Childs, Kevin L., Jiang, Ning, Lyons, Eric, Freeling, Michael, Puzey, Joshua R., Knapp, Steven J.
Publicado no Nat Genet (2019)