A Tri-Component Conservation Strategy Reveals Highly Confident MicroRNA-mRNA Interactions and Evolution of MicroRNA Regulatory Networks

Por Lin, Chen-Ching, Mitra, Ramkrishna, Zhao, Zhongming
Publicado em 2014

Functional consequences of somatic mutations in cancer using protein pocket-based prioritization approach

Por Vuong, Huy, Cheng, Feixiong, Lin, Chen-Ching, Zhao, Zhongming
Publicado em 2014

Cross-cancer differential co-expression network reveals microRNA-regulated oncogenic functional modules

Por Lin, Chen-Ching, Mitra, Ramkrishna, Cheng, Feixiong, Zhao, Zhongming
Publicado no Mol Biosyst (2015)

Dynamic protein interaction modules in human hepatocellular carcinoma progression

Por Yu, Hui, Lin, Chen-Ching, Li, Yuan-Yuan, Zhao, Zhongming
Publicado em 2013

Differential MicroRNA Regulation Correlates with Alternative Polyadenylation Pattern between Breast Cancer and Normal Cells

Por Liaw, Hao-Han, Lin, Chen-Ching, Juan, Hsueh-Fen, Huang, Hsuan-Cheng
Publicado em 2013

Concordant dysregulation of miR-5p and miR-3p arms of the same precursor microRNA may be a mechanism in inducing cell proliferation and tumorigenesis: a lung cancer study

Por Mitra, Ramkrishna, Lin, Chen-Ching, Eischen, Christine M., Bandyopadhyay, Sanghamitra, Zhao, Zhongming
Publicado no RNA (2015)

Regulation rewiring analysis reveals mutual regulation between STAT1 and miR-155-5p in tumor immunosurveillance in seven major cancers

Por Lin, Chen-Ching, Jiang, Wei, Mitra, Ramkrishna, Cheng, Feixiong, Yu, Hui, Zhao, Zhongming
Publicado no Sci Rep (2015)

Systematic dissection of dysregulated transcription factor–miRNA feed-forward loops across tumor types

Por Jiang, Wei, Mitra, Ramkrishna, Lin, Chen-Ching, Wang, Quan, Cheng, Feixiong, Zhao, Zhongming
Publicado no Brief Bioinform (2016)

Studying Tumorigenesis through Network Evolution and Somatic Mutational Perturbations in the Cancer Interactome

Por Cheng, Feixiong, Jia, Peilin, Wang, Quan, Lin, Chen-Ching, Li, Wen-Hsiung, Zhao, Zhongming
Publicado em 2014

Integrative network analysis reveals active microRNAs and their functions in gastric cancer

Por Tseng, Chien-Wei, Lin, Chen-Ching, Chen, Chiung-Nien, Huang, Hsuan-Cheng, Juan, Hsueh-Fen
Publicado em 2011

Link Clustering Reveals Structural Characteristics and Biological Contexts in Signed Molecular Networks

Por Lin, Chen-Ching, Lee, Chia-Hsien, Fuh, Chiou-Shann, Juan, Hsueh-Fen, Huang, Hsuan-Cheng
Publicado em 2013

A Gene Gravity Model for the Evolution of Cancer Genomes: A Study of 3,000 Cancer Genomes across 9 Cancer Types

Por Cheng, Feixiong, Liu, Chuang, Lin, Chen-Ching, Zhao, Junfei, Jia, Peilin, Li, Wen-Hsiung, Zhao, Zhongming
Publicado no PLoS Comput Biol (2015)

Dynamic functional modules in co-expressed protein interaction networks of dilated cardiomyopathy

Por Lin, Chen-Ching, Hsiang, Jen-Tsung, Wu, Chia-Yi, Oyang, Yen-Jen, Juan, Hsueh-Fen, Huang, Hsuan-Cheng
Publicado em 2010

Crosstalk between transcription factors and microRNAs in human protein interaction network

Por Lin, Chen-Ching, Chen, Ya-Jen, Chen, Cho-Yi, Oyang, Yen-Jen, Juan, Hsueh-Fen, Huang, Hsuan-Cheng
Publicado em 2012

MicroRNA-Regulated Protein-Protein Interaction Networks and Their Functions in Breast Cancer

Por Lee, Chia-Hsien, Kuo, Wen-Hong, Lin, Chen-Ching, Oyang, Yen-Jen, Huang, Hsuan-Cheng, Juan, Hsueh-Fen
Publicado em 2013

Co-expression analysis identifies long noncoding RNA SNHG1 as a novel predictor for event-free survival in neuroblastoma

Por Sahu, Divya, Hsu, Chia-Lang, Lin, Chen-Ching, Yang, Tz-Wen, Hsu, Wen-Ming, Ho, Shinn-Ying, Juan, Hsueh-Fen, Huang, Hsuan-Cheng
Publicado no Oncotarget (2016)

Profiling Lipid–protein Interactions Using Nonquenched Fluorescent Liposomal Nanovesicles and Proteome Microarrays

Por Lu, Kuan-Yi, Tao, Sheng-Ce, Yang, Tzu-Ching, Ho, Yu-Hsuan, Lee, Chia-Hsien, Lin, Chen-Ching, Juan, Hsueh-Fen, Huang, Hsuan-Cheng, Yang, Chin-Yu, Chen, Ming-Shuo, Lin, Yu-Yi, Lu, Jin-Ying, Zhu, Heng, Chen, Chien-Sheng
Publicado em 2012