KISSPLICE: de-novo calling alternative splicing events from RNA-seq data

Por Sacomoto, Gustavo AT, Kielbassa, Janice, Chikhi, Rayan, Uricaru, Raluca, Antoniou, Pavlos, Sagot, Marie-France, Peterlongo, Pierre, Lacroix, Vincent
Publicado em 2012

Exploration of the core metabolism of symbiotic bacteria

Por Klein, Cecilia Coimbra, Cottret, Ludovic, Kielbassa, Janice, Charles, Hubert, Gautier, Christian, Ribeiro de Vasconcelos, Ana Tereza, Lacroix, Vincent, Sagot, Marie-France
Publicado em 2012

Comprehensive characterization of claudin-low breast tumors reflects the impact of the cell-of-origin on cancer evolution

Por Pommier, Roxane M., Sanlaville, Amélien, Tonon, Laurie, Kielbassa, Janice, Thomas, Emilie, Ferrari, Anthony, Sertier, Anne-Sophie, Hollande, Frédéric, Martinez, Pierre, Tissier, Agnès, Morel, Anne-Pierre, Ouzounova, Maria, Puisieux, Alain
Publicado no Nat Commun (2020)

A 13-gene expression-based radioresistance score highlights the heterogeneity in the response to radiation therapy across HPV-negative HNSCC molecular subtypes

Por Foy, Jean-Philippe, Bazire, Louis, Ortiz-Cuaran, Sandra, Deneuve, Sophie, Kielbassa, Janice, Thomas, Emilie, Viari, Alain, Puisieux, Alain, Goudot, Patrick, Bertolus, Chloé, Foray, Nicolas, Kirova, Youlia, Verrelle, Pierre, Saintigny, Pierre
Publicado no BMC Med (2017)

SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence

Por Lopez-Maestre, Hélène, Brinza, Lilia, Marchet, Camille, Kielbassa, Janice, Bastien, Sylvère, Boutigny, Mathilde, Monnin, David, Filali, Adil El, Carareto, Claudia Marcia, Vieira, Cristina, Picard, Franck, Kremer, Natacha, Vavre, Fabrice, Sagot, Marie-France, Lacroix, Vincent
Publicado no Nucleic Acids Res (2016)

Immunological and classical subtypes of oral premalignant lesions

Por Foy, Jean-Philippe, Bertolus, Chloé, Ortiz-Cuaran, Sandra, Albaret, Marie-Alexandra, Williams, William N, Lang, Wenhua, Destandau, Solène, Souza, Geneviève De, Sohier, Emilie, Kielbassa, Janice, Thomas, Emilie, Deneuve, Sophie, Goudot, Patrick, Puisieux, Alain, Viari, Alain, Mao, Li, Caux, Christophe, Lippman, SM, Saintigny, P
Publicado no Oncoimmunology (2018)

A whole-genome sequence and transcriptome perspective on HER2-positive breast cancers

Por Ferrari, Anthony, Vincent-Salomon, Anne, Pivot, Xavier, Sertier, Anne-Sophie, Thomas, Emilie, Tonon, Laurie, Boyault, Sandrine, Mulugeta, Eskeatnaf, Treilleux, Isabelle, MacGrogan, Gaëtan, Arnould, Laurent, Kielbassa, Janice, Le Texier, Vincent, Blanché, Hélène, Deleuze, Jean-François, Jacquemier, Jocelyne, Mathieu, Marie-Christine, Penault-Llorca, Frédérique, Bibeau, Frédéric, Mariani, Odette, Mannina, Cécile, Pierga, Jean-Yves, Trédan, Olivier, Bachelot, Thomas, Bonnefoi, Hervé, Romieu, Gilles, Fumoleau, Pierre, Delaloge, Suzette, Rios, Maria, Ferrero, Jean-Marc, Tarpin, Carole, Bouteille, Catherine, Calvo, Fabien, Gut, Ivo Glynne, Gut, Marta, Martin, Sancha, Nik-Zainal, Serena, Stratton, Michael R., Pauporté, Iris, Saintigny, Pierre, Birnbaum, Daniel, Viari, Alain, Thomas, Gilles
Publicado no Nat Commun (2016)