SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization

بواسطة Katayama, Shintaro, Töhönen, Virpi, Linnarsson, Sten, Kere, Juha
منشور في 2013

Human Wound-Healing Research: Issues and Perspectives for Studies Using Wide-Scale Analytic Platforms

بواسطة Nuutila, Kristo, Katayama, Shintaro, Vuola, Jyrki, Kankuri, Esko
منشور في 2014

CAGE-TSSchip: promoter-based expression profiling using the 5'-leading label of capped transcripts

بواسطة Katayama, Shintaro, Kanamori-Katayama, Mutsumi, Yamaguchi, Kazumi, Carninci, Piero, Hayashizaki, Yoshihide
منشور في 2007

Guide for library design and bias correction for large-scale transcriptome studies using highly multiplexed RNAseq methods

بواسطة Katayama, Shintaro, Skoog, Tiina, Söderhäll, Cilla, Einarsdottir, Elisabet, Krjutškov, Kaarel, Kere, Juha
الحاوية / القاعدة BMC Bioinformatics (2019)

A preliminary transcriptome analysis suggests a transitory effect of vitamin D on mitochondrial function in obese young Finnish subjects

بواسطة Einarsdottir, Elisabet, Pekkinen, Minna, Krjutškov, Kaarel, Katayama, Shintaro, Kere, Juha, Mäkitie, Outi, Viljakainen, Heli
الحاوية / القاعدة Endocr Connect (2019)

Dyslexia Candidate Gene and Ciliary Gene Expression Dynamics During Human Neuronal Differentiation

بواسطة Bieder, Andrea, Yoshihara, Masahito, Katayama, Shintaro, Krjutškov, Kaarel, Falk, Anna, Kere, Juha, Tapia-Páez, Isabel
الحاوية / القاعدة Mol Neurobiol (2020)

CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis

بواسطة Kawaji, Hideya, Kasukawa, Takeya, Fukuda, Shiro, Katayama, Shintaro, Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide
منشور في 2006

The complexity of the mammalian transcriptome

بواسطة Gustincich, Stefano, Sandelin, Albin, Plessy, Charles, Katayama, Shintaro, Simone, Roberto, Lazarevic, Dejan, Hayashizaki, Yoshihide, Carninci, Piero
منشور في 2006

Differences in Gene Expression between Mouse and Human for Dynamically Regulated Genes in Early Embryo

بواسطة Madissoon, Elo, Töhönen, Virpi, Vesterlund, Liselotte, Katayama, Shintaro, Unneberg, Per, Inzunza, Jose, Hovatta, Outi, Kere, Juha
منشور في 2014

Dynamic usage of transcription start sites within core promoters

بواسطة Kawaji, Hideya, Frith, Martin C, Katayama, Shintaro, Sandelin, Albin, Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide
منشور في 2006

Gene-Expression Profiling Suggests Impaired Signaling via the Interferon Pathway in Cstb(-/-) Microglia

بواسطة Körber, Inken, Katayama, Shintaro, Einarsdottir, Elisabet, Krjutškov, Kaarel, Hakala, Paula, Kere, Juha, Lehesjoki, Anna-Elina, Joensuu, Tarja
الحاوية / القاعدة PLoS One (2016)

Phylogenetic and mutational analyses of human LEUTX, a homeobox gene implicated in embryogenesis

بواسطة Katayama, Shintaro, Ranga, Vipin, Jouhilahti, Eeva-Mari, Airenne, Tomi T., Johnson, Mark S., Mukherjee, Krishanu, Bürglin, Thomas R., Kere, Juha
الحاوية / القاعدة Sci Rep (2018)

Human pluripotent reprogramming with CRISPR activators

بواسطة Weltner, Jere, Balboa, Diego, Katayama, Shintaro, Bespalov, Maxim, Krjutškov, Kaarel, Jouhilahti, Eeva-Mari, Trokovic, Ras, Kere, Juha, Otonkoski, Timo
الحاوية / القاعدة Nat Commun (2018)

Pleomorphic Adenoma Gene 1 Is Needed For Timely Zygotic Genome Activation and Early Embryo Development

بواسطة Madissoon, Elo, Damdimopoulos, Anastasios, Katayama, Shintaro, Krjutškov, Kaarel, Einarsdottir, Elisabet, Mamia, Katariina, De Groef, Bert, Hovatta, Outi, Kere, Juha, Damdimopoulou, Pauliina
الحاوية / القاعدة Sci Rep (2019)

Complement in Human Pre-implantation Embryos: Attack and Defense

بواسطة Reichhardt, Martin P., Lundin, Karolina, Lokki, A. Inkeri, Recher, Gaëlle, Vuoristo, Sanna, Katayama, Shintaro, Tapanainen, Juha S., Kere, Juha, Meri, Seppo, Tuuri, Timo
الحاوية / القاعدة Front Immunol (2019)

Mlh1 deficiency in normal mouse colon mucosa associates with chromosomally unstable colon cancer

بواسطة Pussila, Marjaana, Törönen, Petri, Einarsdottir, Elisabet, Katayama, Shintaro, Krjutškov, Kaarel, Holm, Liisa, Kere, Juha, Peltomäki, Päivi, Mäkinen, Markus J, Linden, Jere, Nyström, Minna
الحاوية / القاعدة Carcinogenesis (2018)

Intracellular signalling pathways and cytoskeletal functions converge on the psoriasis candidate gene CCHCR1 expressed at P-bodies and centrosomes

بواسطة Tervaniemi, Mari H., Katayama, Shintaro, Skoog, Tiina, Siitonen, H. Annika, Vuola, Jyrki, Nuutila, Kristo, Tammimies, Kristiina, Suomela, Sari, Kankuri, Esko, Kere, Juha, Elomaa, Outi
الحاوية / القاعدة BMC Genomics (2018)

Hidden layers of human small RNAs

بواسطة Kawaji, Hideya, Nakamura, Mari, Takahashi, Yukari, Sandelin, Albin, Katayama, Shintaro, Fukuda, Shiro, Daub, Carsten O, Kai, Chikatoshi, Kawai, Jun, Yasuda, Jun, Carninci, Piero, Hayashizaki, Yoshihide
منشور في 2008

Ketogenic diet attenuates hepatopathy in mouse model of respiratory chain complex III deficiency caused by a Bcs1l mutation

بواسطة Purhonen, Janne, Rajendran, Jayasimman, Mörgelin, Matthias, Uusi-Rauva, Kristiina, Katayama, Shintaro, Krjutskov, Kaarel, Einarsdottir, Elisabet, Velagapudi, Vidya, Kere, Juha, Jauhiainen, Matti, Fellman, Vineta, Kallijärvi, Jukka
الحاوية / القاعدة Sci Rep (2017)

Epigenetic alterations in skin homing CD4(+)CLA(+) T cells of atopic dermatitis patients

بواسطة Acevedo, Nathalie, Benfeitas, Rui, Katayama, Shintaro, Bruhn, Sören, Andersson, Anna, Wikberg, Gustav, Lundeberg, Lena, Lindvall, Jessica M., Greco, Dario, Kere, Juha, Söderhäll, Cilla, Scheynius, Annika
الحاوية / القاعدة Sci Rep (2020)