BACA: bubble chArt to compare annotations

af Fortino, Vittorio, Alenius, Harri, Greco, Dario
Udgivet i BMC Bioinformatics (2015)

CpGmotifs: a tool to discover DNA motifs associated to CpG methylation events

af Scala, Giovanni, Federico, Antonio, Greco, Dario
Udgivet i BMC Bioinformatics (2021)

IntEREst: intron-exon retention estimator

af Oghabian, Ali, Greco, Dario, Frilander, Mikko J.
Udgivet i BMC Bioinformatics (2018)

Bayesian integrated modeling of expression data: a case study on RhoG

af Gupta, Rashi, Greco, Dario, Auvinen, Petri, Arjas, Elja
Udgivet 2010

An integrated quantitative structure and mechanism of action-activity relationship model of human serum albumin binding

af Serra, Angela, Önlü, Serli, Coretto, Pietro, Greco, Dario
Udgivet i J Cheminform (2019)

Covid-19 acute responses and possible long term consequences: What nanotoxicology can teach us

af Kinaret, Pia A.S., del Giudice, Giusy, Greco, Dario
Udgivet i Nano Today (2020)

A Robust and Accurate Method for Feature Selection and Prioritization from Multi-Class OMICs Data

af Fortino, Vittorio, Kinaret, Pia, Fyhrquist, Nanna, Alenius, Harri, Greco, Dario
Udgivet 2014

Strong conservation of inbred mouse strain microRNA loci but broad variation in brain microRNAs due to RNA editing and isomiR expression

af Trontti, Kalevi, Väänänen, Juho, Sipilä, Tessa, Greco, Dario, Hovatta, Iiris
Udgivet i RNA (2018)

Knowledge Generation with Rule Induction in Cancer Omics

af Scala, Giovanni, Federico, Antonio, Fortino, Vittorio, Greco, Dario, Majello, Barbara
Udgivet i Int J Mol Sci (2019)

DNA sequence context as a marker of CpG methylation instability in normal and cancer tissues

af Scala, Giovanni, Federico, Antonio, Palumbo, Domenico, Cocozza, Sergio, Greco, Dario
Udgivet i Sci Rep (2020)

Gene expression analysis of Drosophilaa Manf mutants reveals perturbations in membrane traffic and major metabolic changes

af Palgi, Mari, Greco, Dario, Lindström, Riitta, Auvinen, Petri, Heino, Tapio I
Udgivet 2012

Transcriptome dynamics-based operon prediction in prokaryotes

af Fortino, Vittorio, Smolander, Olli-Pekka, Auvinen, Petri, Tagliaferri, Roberto, Greco, Dario
Udgivet i BMC Bioinformatics (2014)

Clustering based approach for population level identification of condition-associated T-cell receptor β-chain CDR3 sequences

af Yohannes, Dawit A., Kaukinen, Katri, Kurppa, Kalle, Saavalainen, Päivi, Greco, Dario
Udgivet i BMC Bioinformatics (2021)

Gene Expression Profiling of Gliadin Effects on Intestinal Epithelial Cells Suggests Novel Non-Enzymatic Functions of Pepsin and Trypsin

af Parmar, Amarjit, Greco, Dario, Venäläinen, Jarkko, Gentile, Massimiliano, Dukes, Emma, Saavalainen, Päivi
Udgivet 2013

A multi-view genomic data simulator

af Fratello, Michele, Serra, Angela, Fortino, Vittorio, Raiconi, Giancarlo, Tagliaferri, Roberto, Greco, Dario
Udgivet i BMC Bioinformatics (2015)

MVDA: a multi-view genomic data integration methodology

af Serra, Angela, Fratello, Michele, Fortino, Vittorio, Raiconi, Giancarlo, Tagliaferri, Roberto, Greco, Dario
Udgivet i BMC Bioinformatics (2015)

Integration of genome-wide mRNA and miRNA expression, and DNA methylation data of three cell lines exposed to ten carbon nanomaterials

af Scala, Giovanni, Marwah, Veer, Kinaret, Pia, Sund, Jukka, Fortino, Vittorio, Greco, Dario
Udgivet i Data Brief (2018)

FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments

af Scala, Giovanni, Serra, Angela, Marwah, Veer Singh, Saarimäki, Laura Aliisa, Greco, Dario
Udgivet i BMC Bioinformatics (2019)

Multi-omics analysis of ten carbon nanomaterials effects highlights cell type specific patterns of molecular regulation and adaptation

af Scala, Giovanni, Kinaret, Pia, Marwah, Veer, Sund, Jukka, Fortino, Vittorio, Greco, Dario
Udgivet i NanoImpact (2018)

Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients

af Federico, Antonio, Hautanen, Veera, Christian, Nils, Kremer, Andreas, Serra, Angela, Greco, Dario
Udgivet i Sci Data (2020)