Shared Genetic Signals of Hypoxia Adaptation in Drosophila and in High-Altitude Human Populations

Por Jha, Aashish R., Zhou, Dan, Brown, Christopher D., Kreitman, Martin, Haddad, Gabriel G., White, Kevin P.
Publicado no Mol Biol Evol (2016)

Whole-Genome Resequencing of Experimental Populations Reveals Polygenic Basis of Egg-Size Variation in Drosophila melanogaster

Por Jha, Aashish R., Miles, Cecelia M., Lippert, Nodia R., Brown, Christopher D., White, Kevin P., Kreitman, Martin
Publicado no Mol Biol Evol (2015)

Human Endogenous Retrovirus K106 (HERV-K106) Was Infectious after the Emergence of Anatomically Modern Humans

Por Jha, Aashish R., Nixon, Douglas F., Rosenberg, Michael G., Martin, Jeffrey N., Deeks, Steven G., Hudson, Richard R., Garrison, Keith E., Pillai, Satish K.
Publicado em 2011

Associations between Antibodies to a Panel of Plasmodium falciparum Specific Antigens and Response to Sub-Optimal Antimalarial Therapy in Kampala, Uganda

Por Keh, Chris E., Jha, Aashish R., Nzarubara, Bridget, Lanar, David E., Dutta, Sheetij, Theisen, Michael, Rosenthal, Philip J., Dorsey, Grant, Nixon, Douglas F., Greenhouse, Bryan
Publicado em 2012

miR-9a minimizes the phenotypic impact of genomic diversity by buffering a transcription factor

Por Cassidy, Justin J., Jha, Aashish R., Posadas, Diana M., Giri, Ritika, Venken, Koen J.T., Ji, Jingran, Jiang, Hongmei, Bellen, Hugo J., White, Kevin P., Carthew, Richard W.
Publicado em 2013

Interleukin-10-secreting T cells define a suppressive subset within the HIV-1-specific T-cell population

Por Torheim, Eirik A., Ndhlovu, Lishomwa C., Pettersen, Frank O., Larsen, Trine-Lise, Jha, Aashish R., Torgersen, Knut M., Kvale, Dag, Nixon, Douglas F., Taskén, Kjetil, Aandahl, Einar Martin
Publicado em 2009

Suppression of HIV-1 plasma viral load below detection preserves IL-17 producing T cells in HIV-1 infection

Por Ndhlovu, Lishomwa C., Chapman, Joan M., Jha, Aashish R., Snyder-Cappione, Jennifer E., Pagán, Moraima, Leal, Fabio E., Boland, Brigid S., Norris, Philip J., Rosenberg, Michael G., Nixon, Douglas F.
Publicado em 2008

Tim-3 marks human natural killer cell maturation and suppresses cell-mediated cytotoxicity

Por Ndhlovu, Lishomwa C., Lopez-Vergès, Sandra, Barbour, Jason D., Jones, R. Brad, Jha, Aashish R., Long, Brian R., Schoeffler, Eric C., Fujita, Tsuyoshi, Nixon, Douglas F., Lanier, Lewis L.
Publicado em 2012

IL-2 Immunotherapy to Recently HIV-1 Infected Adults Maintains the Numbers of IL-17 Expressing CD4+ T (T(H)17) Cells in the Periphery

Por Ndhlovu, Lishomwa C., Sinclair, Elizabeth, Epling, Lorrie, Tan, Qi Xuan, Ho, Terence, Jha, Aashish R., Eccles-James, Ijeoma, Tincati, Camilla, Levy, Jay A., Nixon, Douglas F., Hecht, Frederick M., Barbour, Jason D.
Publicado em 2010

Cross-Sectional Dating of Novel Haplotypes of HERV-K 113 and HERV-K 115 Indicate These Proviruses Originated in Africa before Homo sapiens

Por Jha, Aashish R., Pillai, Satish K., York, Vanessa A., Sharp, Elizabeth R., Storm, Emily C., Wachter, Douglas J., Martin, Jeffrey N., Deeks, Steven G., Rosenberg, Michael G., Nixon, Douglas F., Garrison, Keith E.
Publicado em 2009

Integrative genomics reveals hypoxia inducible genes that are associated with a poor prognosis in neuroblastoma patients

Por Applebaum, Mark A., Jha, Aashish R., Kao, Clara, Hernandez, Kyle M., DeWane, Gillian, Salwen, Helen R., Chlenski, Alexandre, Dobratic, Marija, Mariani, Christopher J., Godley, Lucy A., Prabhakar, Nanduri, White, Kevin, Stranger, Barbara E., Cohn, Susan L.
Publicado no Oncotarget (2016)

A Novel Human CD4+ T cell Inducer Subset with Potent Immunostimulatory Properties

Por Ndhlovu, Lishomwa C., Leal, Fabio E., Eccles-James, Ijeoma G., Jha, Aashish R., Lanteri, Marion, Norris, Philip J., Barbour, Jason D., Wachter, Douglas J., Andersson, Jan, Taskén, Kjetil, Torheim, Eirik A., Aandahl, Einar M., Kallas, Esper G., Nixon, Douglas F.
Publicado em 2010

HTLV-1 Tax Specific CD8+ T cells express low levels of Tim-3 in HTLV-1 infection: implications for progression to neurological complications

Por Leal, Fabio E, Ndhlovu, Lishomwa C, Hasenkrug, Aaron M, Jha, Aashish R, Carvalho, Karina I, Eccles-James, Ijeoma G, Bruno, Fernanda R, Vieira, Raphaella G, York, Vanessa A, Jones, R Brad, Tanaka, Yuetsu, Neto, Walter K, Sanabani, Sabri S, Ostrowski, Mario A, Segurado, Aluisio C, Nixon, Douglas F, Kallas, Esper G
Publicado em 2011

HTLV-1 Tax Specific CD8+ T Cells Express Low Levels of Tim-3 in HTLV-1 Infection: Implications for Progression to Neurological Complications

Por Ndhlovu, Lishomwa C., Leal, Fabio E., Hasenkrug, Aaron M., Jha, Aashish R., Carvalho, Karina I., Eccles-James, Ijeoma G., Bruno, Fernanda R., Vieira, Raphaella G. S., York, Vanessa A., Chew, Glen M., Jones, R. Brad, Tanaka, Yuetsu, Neto, Walter K., Sanabani, Sabri S., Ostrowski, Mario A., Segurado, Aluisio C., Nixon, Douglas F., Kallas, Esper G.
Publicado em 2011

Tim-3 expression defines a novel population of dysfunctional T cells with highly elevated frequencies in progressive HIV-1 infection

Por Jones, R. Brad, Ndhlovu, Lishomwa C., Barbour, Jason D., Sheth, Prameet M., Jha, Aashish R., Long, Brian R., Wong, Jessica C., Satkunarajah, Malathy, Schweneker, Marc, Chapman, Joan M., Gyenes, Gabor, Vali, Bahareh, Hyrcza, Martin D., Yue, Feng Yun, Kovacs, Colin, Sassi, Aref, Loutfy, Mona, Halpenny, Roberta, Persad, Desmond, Spotts, Gerald, Hecht, Frederick M., Chun, Tae-Wook, McCune, Joseph M., Kaul, Rupert, Rini, James M., Nixon, Douglas F., Ostrowski, Mario A.
Publicado em 2008

Global diversity, population stratification, and selection of human copy number variation

Por Sudmant, Peter H., Mallick, Swapan, Nelson, Bradley J., Hormozdiari, Fereydoun, Krumm, Niklas, Huddleston, John, Coe, Bradley P., Baker, Carl, Nordenfelt, Susanne, Bamshad, Michael, Jorde, Lynn B., Posukh, Olga L., Sahakyan, Hovhannes, Watkins, W. Scott, Yepiskoposyan, Levon, Abdullah, M. Syafiq, Bravi, Claudio M., Capelli, Cristian, Hervig, Tor, Wee, Joseph T. S., Tyler-Smith, Chris, van Driem, George, Romero, Irene Gallego, Jha, Aashish R., Karachanak-Yankova, Sena, Toncheva, Draga, Comas, David, Henn, Brenna, Kivisild, Toomas, Ruiz-Linares, Andres, Sajantila, Antti, Metspalu, Ene, Parik, Jüri, Villems, Richard, Starikovskaya, Elena B., Ayodo, George, Beall, Cynthia M., Di Rienzo, Anna, Hammer, Michael, Khusainova, Rita, Khusnutdinova, Elza, Klitz, William, Winkler, Cheryl, Labuda, Damian, Metspalu, Mait, Tishkoff, Sarah A., Dryomov, Stanislav, Sukernik, Rem, Patterson, Nick, Reich, David, Eichler, Evan E.
Publicado no Science (2015)

An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia

Por Rasmussen, Morten, Guo, Xiaosen, Wang, Yong, Lohmueller, Kirk E., Rasmussen, Simon, Albrechtsen, Anders, Skotte, Line, Lindgreen, Stinus, Metspalu, Mait, Jombart, Thibaut, Kivisild, Toomas, Zhai, Weiwei, Eriksson, Anders, Manica, Andrea, Orlando, Ludovic, De La Vega, Francisco M., Tridico, Silvana, Metspalu, Ene, Nielsen, Kasper, Ávila-Arcos, María C., Moreno-Mayar, J. Víctor, Muller, Craig, Dortch, Joe, Gilbert, M. Thomas P., Lund, Ole, Wesolowska, Agata, Karmin, Monika, Weinert, Lucy A., Wang, Bo, Li, Jun, Tai, Shuaishuai, Xiao, Fei, Hanihara, Tsunehiko, van Driem, George, Jha, Aashish R., Ricaut, François-Xavier, de Knijff, Peter, Migliano, Andrea B, Romero, Irene Gallego, Kristiansen, Karsten, Lambert, David M., Brunak, Søren, Forster, Peter, Brinkmann, Bernd, Nehlich, Olaf, Bunce, Michael, Richards, Michael, Gupta, Ramneek, Bustamante, Carlos D., Krogh, Anders, Foley, Robert A., Lahr, Marta M., Balloux, Francois, Sicheritz-Pontén, Thomas, Villems, Richard, Nielsen, Rasmus, Wang, Jun, Willerslev, Eske
Publicado em 2011

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

Por Mallick, Swapan, Li, Heng, Lipson, Mark, Mathieson, Iain, Gymrek, Melissa, Racimo, Fernando, Zhao, Mengyao, Chennagiri, Niru, Nordenfelt, Susanne, Tandon, Arti, Skoglund, Pontus, Lazaridis, Iosif, Sankararaman, Sriram, Fu, Qiaomei, Rohland, Nadin, Renaud, Gabriel, Erlich, Yaniv, Willems, Thomas, Gallo, Carla, Spence, Jeffrey P., Song, Yun S., Poletti, Giovanni, Balloux, Francois, van Driem, George, de Knijff, Peter, Romero, Irene Gallego, Jha, Aashish R., Behar, Doron M., Bravi, Claudio M., Capelli, Cristian, Hervig, Tor, Moreno-Estrada, Andres, Posukh, Olga L., Balanovska, Elena, Balanovsky, Oleg, Karachanak-Yankova, Sena, Sahakyan, Hovhannes, Toncheva, Draga, Yepiskoposyan, Levon, Tyler-Smith, Chris, Xue, Yali, Abdullah, M. Syafiq, Ruiz-Linares, Andres, Beall, Cynthia M., Di Rienzo, Anna, Jeong, Choongwon, Starikovskaya, Elena B., Metspalu, Ene, Parik, Jüri, Villems, Richard, Henn, Brenna M., Hodoglugil, Ugur, Mahley, Robert, Sajantila, Antti, Stamatoyannopoulos, George, Wee, Joseph T. S., Khusainova, Rita, Khusnutdinova, Elza, Litvinov, Sergey, Ayodo, George, Comas, David, Hammer, Michael, Kivisild, Toomas, Klitz, William, Winkler, Cheryl, Labuda, Damian, Bamshad, Michael, Jorde, Lynn B., Tishkoff, Sarah A., Watkins, W. Scott, Metspalu, Mait, Dryomov, Stanislav, Sukernik, Rem, Singh, Lalji, Thangaraj, Kumarasamy, Pääbo, Svante, Kelso, Janet, Patterson, Nick, Reich, David
Publicado no Nature (2016)

Ancient human genomes suggest three ancestral populations for present-day Europeans

Por Lazaridis, Iosif, Patterson, Nick, Mittnik, Alissa, Renaud, Gabriel, Mallick, Swapan, Kirsanow, Karola, Sudmant, Peter H., Schraiber, Joshua G., Castellano, Sergi, Lipson, Mark, Berger, Bonnie, Economou, Christos, Bollongino, Ruth, Fu, Qiaomei, Bos, Kirsten I., Nordenfelt, Susanne, Li, Heng, de Filippo, Cesare, Prüfer, Kay, Sawyer, Susanna, Posth, Cosimo, Haak, Wolfgang, Hallgren, Fredrik, Fornander, Elin, Rohland, Nadin, Delsate, Dominique, Francken, Michael, Guinet, Jean-Michel, Wahl, Joachim, Ayodo, George, Babiker, Hamza A., Bailliet, Graciela, Balanovska, Elena, Balanovsky, Oleg, Barrantes, Ramiro, Bedoya, Gabriel, Ben-Ami, Haim, Bene, Judit, Berrada, Fouad, Bravi, Claudio M., Brisighelli, Francesca, Busby, George B. J., Cali, Francesco, Churnosov, Mikhail, Cole, David E. C., Corach, Daniel, Damba, Larissa, van Driem, George, Dryomov, Stanislav, Dugoujon, Jean-Michel, Fedorova, Sardana A., Romero, Irene Gallego, Gubina, Marina, Hammer, Michael, Henn, Brenna M., Hervig, Tor, Hodoglugil, Ugur, Jha, Aashish R., Karachanak-Yankova, Sena, Khusainova, Rita, Khusnutdinova, Elza, Kittles, Rick, Kivisild, Toomas, Klitz, William, Kučinskas, Vaidutis, Kushniarevich, Alena, Laredj, Leila, Litvinov, Sergey, Loukidis, Theologos, Mahley, Robert W., Melegh, Béla, Metspalu, Ene, Molina, Julio, Mountain, Joanna, Näkkäläjärvi, Klemetti, Nesheva, Desislava, Nyambo, Thomas, Osipova, Ludmila, Parik, Jüri, Platonov, Fedor, Posukh, Olga, Romano, Valentino, Rothhammer, Francisco, Rudan, Igor, Ruizbakiev, Ruslan, Sahakyan, Hovhannes, Sajantila, Antti, Salas, Antonio, Starikovskaya, Elena B., Tarekegn, Ayele, Toncheva, Draga, Turdikulova, Shahlo, Uktveryte, Ingrida, Utevska, Olga, Vasquez, René, Villena, Mercedes, Voevoda, Mikhail, Winkler, Cheryl, Yepiskoposyan, Levon, Zalloua, Pierre, Zemunik, Tatijana, Cooper, Alan, Capelli, Cristian, Thomas, Mark G., Ruiz-Linares, Andres, Tishkoff, Sarah A., Singh, Lalji, Thangaraj, Kumarasamy, Villems, Richard, Comas, David, Sukernik, Rem, Metspalu, Mait, Meyer, Matthias, Eichler, Evan E., Burger, Joachim, Slatkin, Montgomery, Pääbo, Svante, Kelso, Janet, Reich, David, Krause, Johannes
Publicado em 2014