Human Herpesvirus Sequencing in the Genomic Era: The Growing Ranks of the Herpetic Legion

von Houldcroft, Charlotte J.
Veröffentlicht in Pathogens (2019)

Tales from the crypt and coral reef: the successes and challenges of identifying new herpesviruses using metagenomics

von Houldcroft, Charlotte J., Breuer, Judith
Veröffentlicht in Front Microbiol (2015)

Host genetics of Epstein–Barr virus infection, latency and disease

von Houldcroft, Charlotte J, Kellam, Paul
Veröffentlicht in Rev Med Virol (2015)

Network analysis of the hominin origin of Herpes Simplex virus 2 from fossil data

von Underdown, Simon J., Kumar, Krishna, Houldcroft, Charlotte
Veröffentlicht in Virus Evol (2017)

Clinical and biological insights from viral genome sequencing

von Houldcroft, Charlotte J., Beale, Mathew A., Breuer, Judith
Veröffentlicht in Nat Rev Microbiol (2017)

Reply to Jensen and Kowalik: Consideration of mixed infections is central to understanding HCMV intrahost diversity

von Houldcroft, Charlotte J., Cudini, Juliana, Goldstein, Richard A., Breuer, Judith
Veröffentlicht in Proc Natl Acad Sci U S A (2020)

COVID-19, the first pandemic in the post-genomic era

von van Dorp, Lucy, Houldcroft, Charlotte J, Richard, Damien, Balloux, François
Veröffentlicht in Curr Opin Virol (2021)

The Role of aDNA in Understanding the Coevolutionary Patterns of Human Sexually Transmitted Infections

von Pimenoff, Ville N., Houldcroft, Charlotte J., Rifkin, Riaan F., Underdown, Simon
Veröffentlicht in Genes (Basel) (2018)

Identification of novel adenovirus genotype 90 in children from Bangladesh

von Houldcroft, Charlotte J., Beale, Mathew A., Sayeed, Md Abu, Qadri, Firdausi, Dougan, Gordon, Mutreja, Ankur
Veröffentlicht in Microb Genom (2018)

Host Genetic Variants and Gene Expression Patterns Associated with Epstein-Barr Virus Copy Number in Lymphoblastoid Cell Lines

von Houldcroft, Charlotte J., Petrova, Velislava, Liu, Jimmy Z., Frampton, Dan, Anderson, Carl A., Gall, Astrid, Kellam, Paul
Veröffentlicht 2014

Human cytomegalovirus haplotype reconstruction reveals high diversity due to superinfection and evidence of within-host recombination

von Cudini, Juliana, Roy, Sunando, Houldcroft, Charlotte J., Bryant, Josephine M., Depledge, Daniel P., Tutill, Helena, Veys, Paul, Williams, Rachel, Worth, Austen J. J., Tamuri, Asif U., Goldstein, Richard A., Breuer, Judith
Veröffentlicht in Proc Natl Acad Sci U S A (2019)

Disease-associated XMRV sequences are consistent with laboratory contamination

von Hué, Stéphane, Gray, Eleanor R, Gall, Astrid, Katzourakis, Aris, Tan, Choon Ping, Houldcroft, Charlotte J, McLaren, Stuart, Pillay, Deenan, Futreal, Andrew, Garson, Jeremy A, Pybus, Oliver G, Kellam, Paul, Towers, Greg J
Veröffentlicht 2010

Detection of Low Frequency Multi-Drug Resistance and Novel Putative Maribavir Resistance in Immunocompromised Pediatric Patients with Cytomegalovirus

von Houldcroft, Charlotte J., Bryant, Josephine M., Depledge, Daniel P., Margetts, Ben K., Simmonds, Jacob, Nicolaou, Stephanos, Tutill, Helena J., Williams, Rachel, Worth, Austen J. J., Marks, Stephen D., Veys, Paul, Whittaker, Elizabeth, Breuer, Judith
Veröffentlicht in Front Microbiol (2016)

Latent Cytomegalovirus-Driven Recruitment of Activated CD4+ T Cells Promotes Virus Reactivation

von Jackson, Sarah E., Chen, Kevin C., Groves, Ian J., Sedikides, George X., Gandhi, Amar, Houldcroft, Charlotte J., Poole, Emma L., Montanuy, Inmaculada, Mason, Gavin M., Okecha, Georgina, Reeves, Matthew B., Sinclair, John H., Wills, Mark R.
Veröffentlicht in Front Immunol (2021)

Using Whole Genome Sequences to Investigate Adenovirus Outbreaks in a Hematopoietic Stem Cell Transplant Unit

von Myers, Chloe E., Houldcroft, Charlotte J., Roy, Sunando, Margetts, Ben K., Best, Timothy, Venturini, Cristina, Guerra-Assunção, Jose A., Williams, Charlotte A., Williams, Rachel, Dunn, Helen, Hartley, John C., Rao, Kanchan, Rolfe, Kathryn J., Breuer, Judith
Veröffentlicht in Front Microbiol (2021)

Assessing Anti-HCMV Cell Mediated Immune Responses in Transplant Recipients and Healthy Controls Using a Novel Functional Assay

von Houldcroft, Charlotte J., Jackson, Sarah E., Lim, Eleanor Y., Sedikides, George X., Davies, Emma L., Atkinson, Claire, McIntosh, Megan, Remmerswaal, Ester B. M., Okecha, Georgina, Bemelman, Frederike J., Stanton, Richard J., Reeves, Matthew, Wills, Mark R.
Veröffentlicht in Front Cell Infect Microbiol (2020)

High Viral Diversity and Mixed Infections in Cerebral Spinal Fluid From Cases of Varicella Zoster Virus Encephalitis

von Depledge, Daniel P, Cudini, Juliana, Kundu, Samit, Atkinson, Claire, Brown, Julianne R, Haque, Tanzina, Houldcroft, Charlotte J, Koay, Evelyn S, McGill, Fiona, Milne, Richard, Whitfield, Tom, Tang, Julian W, Underhill, Gillian, Bergstrom, Tomas, Norberg, Peter, Goldstein, Richard, Solomon, Tom, Breuer, Judith
Veröffentlicht in J Infect Dis (2018)

Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study

von Meredith, Luke W, Hamilton, William L, Warne, Ben, Houldcroft, Charlotte J, Hosmillo, Myra, Jahun, Aminu S, Curran, Martin D, Parmar, Surendra, Caller, Laura G, Caddy, Sarah L, Khokhar, Fahad A, Yakovleva, Anna, Hall, Grant, Feltwell, Theresa, Forrest, Sally, Sridhar, Sushmita, Weekes, Michael P, Baker, Stephen, Brown, Nicholas, Moore, Elinor, Popay, Ashley, Roddick, Iain, Reacher, Mark, Gouliouris, Theodore, Peacock, Sharon J, Dougan, Gordon, Török, M Estée, Goodfellow, Ian
Veröffentlicht in Lancet Infect Dis (2020)

Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable

von Mavian, Carla, Pond, Sergei Kosakovsky, Marini, Simone, Magalis, Brittany Rife, Vandamme, Anne-Mieke, Dellicour, Simon, Scarpino, Samuel V., Houldcroft, Charlotte, Villabona-Arenas, Julian, Paisie, Taylor K., Trovão, Nídia S., Boucher, Christina, Zhang, Yun, Scheuermann, Richard H., Gascuel, Olivier, Lam, Tommy Tsan-Yuk, Suchard, Marc A., Abecasis, Ana, Wilkinson, Eduan, de Oliveira, Tulio, Bento, Ana I., Schmidt, Heiko A., Martin, Darren, Hadfield, James, Faria, Nuno, Grubaugh, Nathan D., Neher, Richard A., Baele, Guy, Lemey, Philippe, Stadler, Tanja, Albert, Jan, Crandall, Keith A., Leitner, Thomas, Stamatakis, Alexandros, Prosperi, Mattia, Salemi, Marco
Veröffentlicht in Proc Natl Acad Sci U S A (2020)

Genomic epidemiology of COVID-19 in care homes in the east of England

von Hamilton, William L, Tonkin-Hill, Gerry, Smith, Emily R, Aggarwal, Dinesh, Houldcroft, Charlotte J, Warne, Ben, Meredith, Luke W, Hosmillo, Myra, Jahun, Aminu S, Curran, Martin D, Parmar, Surendra, Caller, Laura G, Caddy, Sarah L, Khokhar, Fahad A, Yakovleva, Anna, Hall, Grant, Feltwell, Theresa, Pinckert, Malte L, Georgana, Iliana, Chaudhry, Yasmin, Brown, Colin S, Gonçalves, Sonia, Amato, Roberto, Harrison, Ewan M, Brown, Nicholas M, Beale, Mathew A, Spencer Chapman, Michael, Jackson, David K, Johnston, Ian, Alderton, Alex, Sillitoe, John, Langford, Cordelia, Dougan, Gordon, Peacock, Sharon J, Kwiatowski, Dominic P, Goodfellow, Ian G, Torok, M Estee
Veröffentlicht in eLife (2021)