Mining Tertiary Structural Motifs for Assessment of Designability

由 Zhang, Jian, Grigoryan, Gevorg
發表在 Methods Enzymol (2013)

Rapid search for tertiary fragments reveals protein sequence–structure relationships

由 Zhou, Jianfu, Grigoryan, Gevorg
發表在 Protein Sci (2015)

Sequence statistics of tertiary structural motifs reflect protein stability

由 Zheng, Fan, Grigoryan, Gevorg
發表在 PLoS One (2017)

Structural specificity in coiled-coil interactions

由 Grigoryan, Gevorg, Keating, Amy E.
出版 2008

Protein Structural Motifs in Prediction and Design

由 Mackenzie, Craig O., Grigoryan, Gevorg
發表在 Curr Opin Struct Biol (2017)

Modest membrane hydrogen bonds deliver rich results

由 Grigoryan, Gevorg, DeGrado, William F
出版 2008

Probing Designability via a Generalized Model of Helical Bundle Geometry

由 Grigoryan, Gevorg, DeGrado, William F.
出版 2010

Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

由 Holland, Jack, Pan, Qinxin, Grigoryan, Gevorg
發表在 PLoS One (2018)

Structure-based design of combinatorial mutagenesis libraries

由 Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
發表在 Protein Sci (2015)

Tertiary alphabet for the observable protein structural universe

由 Mackenzie, Craig O., Zhou, Jianfu, Grigoryan, Gevorg
發表在 Proc Natl Acad Sci U S A (2016)

A general-purpose protein design framework based on mining sequence–structure relationships in known protein structures

由 Zhou, Jianfu, Panaitiu, Alexandra E., Grigoryan, Gevorg
發表在 Proc Natl Acad Sci U S A (2020)

Pareto optimization of combinatorial mutagenesis libraries

由 Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
發表在 IEEE/ACM Trans Comput Biol Bioinform (2018)

Design of protein-interaction specificity affords selective bZIP-binding peptides

由 Grigoryan, Gevorg, Reinke, Aaron W., Keating, Amy E.
出版 2009

Identification of bZIP interaction partners of viral proteins HBZ, MEQ, BZLF1, and K-bZIP using coiled-coil arrays

由 Reinke, Aaron W., Grigoryan, Gevorg, Keating, Amy E.
出版 2010

Transmembrane Communication: General Principles and Lessons from the Structure and Function of the M2 Proton Channel, K(+) Channels, and Integrin Receptors

由 Grigoryan, Gevorg, Moore, David T., DeGrado, William F.
出版 2011

The accommodation index measures the perturbation associated with insertions and deletions in coiled‐coils: Application to understand signaling in histidine kinases

由 Schmidt, Nathan W., Grigoryan, Gevorg, DeGrado, William F.
發表在 Protein Sci (2017)

Design of self-assembling transmembrane helical bundles to elucidate principles required for membrane protein folding and ion transport

由 Joh, Nathan H., Grigoryan, Gevorg, Wu, Yibing, DeGrado, William F.
發表在 Philos Trans R Soc Lond B Biol Sci (2017)

Tertiary structural motif sequence statistics enable facile prediction and design of peptides that bind anti-apoptotic Bfl-1 and Mcl-1

由 Frappier, Vincent, Jenson, Justin M., Zhou, Jianfu, Grigoryan, Gevorg, Keating, Amy E.
發表在 Structure (2019)

Deletion of Na(+)/H(+) exchanger regulatory factor 2 represses colon cancer progress by suppression of Stat3 and CD24

由 Yoshida, Michihiro, Zhao, Luqing, Grigoryan, Gevorg, Shim, Hyunsuk, He, Peijian, Yun, C. Chris
發表在 Am J Physiol Gastrointest Liver Physiol (2016)

Computational Design of Selective Peptides to Discriminate Between Similar PDZ Domains in an Oncogenic Pathway

由 Zheng, Fan, Jewell, Heather, Fitzpatrick, Jeremy, Zhang, Jian, Mierke, Dale F., Grigoryan, Gevorg
發表在 J Mol Biol (2014)