Mining Tertiary Structural Motifs for Assessment of Designability

по Zhang, Jian, Grigoryan, Gevorg
Опубликовано в: Methods Enzymol (2013)

Rapid search for tertiary fragments reveals protein sequence–structure relationships

по Zhou, Jianfu, Grigoryan, Gevorg
Опубликовано в: Protein Sci (2015)

Sequence statistics of tertiary structural motifs reflect protein stability

по Zheng, Fan, Grigoryan, Gevorg
Опубликовано в: PLoS One (2017)

Structural specificity in coiled-coil interactions

по Grigoryan, Gevorg, Keating, Amy E.
Опубликовано 2008

Protein Structural Motifs in Prediction and Design

по Mackenzie, Craig O., Grigoryan, Gevorg
Опубликовано в: Curr Opin Struct Biol (2017)

Modest membrane hydrogen bonds deliver rich results

по Grigoryan, Gevorg, DeGrado, William F
Опубликовано 2008

Probing Designability via a Generalized Model of Helical Bundle Geometry

по Grigoryan, Gevorg, DeGrado, William F.
Опубликовано 2010

Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

по Holland, Jack, Pan, Qinxin, Grigoryan, Gevorg
Опубликовано в: PLoS One (2018)

Structure-based design of combinatorial mutagenesis libraries

по Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Опубликовано в: Protein Sci (2015)

Tertiary alphabet for the observable protein structural universe

по Mackenzie, Craig O., Zhou, Jianfu, Grigoryan, Gevorg
Опубликовано в: Proc Natl Acad Sci U S A (2016)

A general-purpose protein design framework based on mining sequence–structure relationships in known protein structures

по Zhou, Jianfu, Panaitiu, Alexandra E., Grigoryan, Gevorg
Опубликовано в: Proc Natl Acad Sci U S A (2020)

Pareto optimization of combinatorial mutagenesis libraries

по Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Опубликовано в: IEEE/ACM Trans Comput Biol Bioinform (2018)

Design of protein-interaction specificity affords selective bZIP-binding peptides

по Grigoryan, Gevorg, Reinke, Aaron W., Keating, Amy E.
Опубликовано 2009

Identification of bZIP interaction partners of viral proteins HBZ, MEQ, BZLF1, and K-bZIP using coiled-coil arrays

по Reinke, Aaron W., Grigoryan, Gevorg, Keating, Amy E.
Опубликовано 2010

Transmembrane Communication: General Principles and Lessons from the Structure and Function of the M2 Proton Channel, K(+) Channels, and Integrin Receptors

по Grigoryan, Gevorg, Moore, David T., DeGrado, William F.
Опубликовано 2011

The accommodation index measures the perturbation associated with insertions and deletions in coiled‐coils: Application to understand signaling in histidine kinases

по Schmidt, Nathan W., Grigoryan, Gevorg, DeGrado, William F.
Опубликовано в: Protein Sci (2017)

Design of self-assembling transmembrane helical bundles to elucidate principles required for membrane protein folding and ion transport

по Joh, Nathan H., Grigoryan, Gevorg, Wu, Yibing, DeGrado, William F.
Опубликовано в: Philos Trans R Soc Lond B Biol Sci (2017)

Tertiary structural motif sequence statistics enable facile prediction and design of peptides that bind anti-apoptotic Bfl-1 and Mcl-1

по Frappier, Vincent, Jenson, Justin M., Zhou, Jianfu, Grigoryan, Gevorg, Keating, Amy E.
Опубликовано в: Structure (2019)

Deletion of Na(+)/H(+) exchanger regulatory factor 2 represses colon cancer progress by suppression of Stat3 and CD24

по Yoshida, Michihiro, Zhao, Luqing, Grigoryan, Gevorg, Shim, Hyunsuk, He, Peijian, Yun, C. Chris
Опубликовано в: Am J Physiol Gastrointest Liver Physiol (2016)

Computational Design of Selective Peptides to Discriminate Between Similar PDZ Domains in an Oncogenic Pathway

по Zheng, Fan, Jewell, Heather, Fitzpatrick, Jeremy, Zhang, Jian, Mierke, Dale F., Grigoryan, Gevorg
Опубликовано в: J Mol Biol (2014)