Mining Tertiary Structural Motifs for Assessment of Designability

od Zhang, Jian, Grigoryan, Gevorg
Izdano u Methods Enzymol (2013)

Rapid search for tertiary fragments reveals protein sequence–structure relationships

od Zhou, Jianfu, Grigoryan, Gevorg
Izdano u Protein Sci (2015)

Sequence statistics of tertiary structural motifs reflect protein stability

od Zheng, Fan, Grigoryan, Gevorg
Izdano u PLoS One (2017)

Structural specificity in coiled-coil interactions

od Grigoryan, Gevorg, Keating, Amy E.
Izdano 2008

Protein Structural Motifs in Prediction and Design

od Mackenzie, Craig O., Grigoryan, Gevorg
Izdano u Curr Opin Struct Biol (2017)

Modest membrane hydrogen bonds deliver rich results

od Grigoryan, Gevorg, DeGrado, William F
Izdano 2008

Probing Designability via a Generalized Model of Helical Bundle Geometry

od Grigoryan, Gevorg, DeGrado, William F.
Izdano 2010

Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

od Holland, Jack, Pan, Qinxin, Grigoryan, Gevorg
Izdano u PLoS One (2018)

Structure-based design of combinatorial mutagenesis libraries

od Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Izdano u Protein Sci (2015)

Tertiary alphabet for the observable protein structural universe

od Mackenzie, Craig O., Zhou, Jianfu, Grigoryan, Gevorg
Izdano u Proc Natl Acad Sci U S A (2016)

A general-purpose protein design framework based on mining sequence–structure relationships in known protein structures

od Zhou, Jianfu, Panaitiu, Alexandra E., Grigoryan, Gevorg
Izdano u Proc Natl Acad Sci U S A (2020)

Pareto optimization of combinatorial mutagenesis libraries

od Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Izdano u IEEE/ACM Trans Comput Biol Bioinform (2018)

Design of protein-interaction specificity affords selective bZIP-binding peptides

od Grigoryan, Gevorg, Reinke, Aaron W., Keating, Amy E.
Izdano 2009

Identification of bZIP interaction partners of viral proteins HBZ, MEQ, BZLF1, and K-bZIP using coiled-coil arrays

od Reinke, Aaron W., Grigoryan, Gevorg, Keating, Amy E.
Izdano 2010

Transmembrane Communication: General Principles and Lessons from the Structure and Function of the M2 Proton Channel, K(+) Channels, and Integrin Receptors

od Grigoryan, Gevorg, Moore, David T., DeGrado, William F.
Izdano 2011

The accommodation index measures the perturbation associated with insertions and deletions in coiled‐coils: Application to understand signaling in histidine kinases

od Schmidt, Nathan W., Grigoryan, Gevorg, DeGrado, William F.
Izdano u Protein Sci (2017)

Design of self-assembling transmembrane helical bundles to elucidate principles required for membrane protein folding and ion transport

od Joh, Nathan H., Grigoryan, Gevorg, Wu, Yibing, DeGrado, William F.
Izdano u Philos Trans R Soc Lond B Biol Sci (2017)

Tertiary structural motif sequence statistics enable facile prediction and design of peptides that bind anti-apoptotic Bfl-1 and Mcl-1

od Frappier, Vincent, Jenson, Justin M., Zhou, Jianfu, Grigoryan, Gevorg, Keating, Amy E.
Izdano u Structure (2019)

Deletion of Na(+)/H(+) exchanger regulatory factor 2 represses colon cancer progress by suppression of Stat3 and CD24

od Yoshida, Michihiro, Zhao, Luqing, Grigoryan, Gevorg, Shim, Hyunsuk, He, Peijian, Yun, C. Chris
Izdano u Am J Physiol Gastrointest Liver Physiol (2016)

Computational Design of Selective Peptides to Discriminate Between Similar PDZ Domains in an Oncogenic Pathway

od Zheng, Fan, Jewell, Heather, Fitzpatrick, Jeremy, Zhang, Jian, Mierke, Dale F., Grigoryan, Gevorg
Izdano u J Mol Biol (2014)