Mining Tertiary Structural Motifs for Assessment of Designability

Tekijä Zhang, Jian, Grigoryan, Gevorg
Julkaisussa Methods Enzymol (2013)

Rapid search for tertiary fragments reveals protein sequence–structure relationships

Tekijä Zhou, Jianfu, Grigoryan, Gevorg
Julkaisussa Protein Sci (2015)

Sequence statistics of tertiary structural motifs reflect protein stability

Tekijä Zheng, Fan, Grigoryan, Gevorg
Julkaisussa PLoS One (2017)

Structural specificity in coiled-coil interactions

Tekijä Grigoryan, Gevorg, Keating, Amy E.
Julkaistu 2008

Protein Structural Motifs in Prediction and Design

Tekijä Mackenzie, Craig O., Grigoryan, Gevorg
Julkaisussa Curr Opin Struct Biol (2017)

Modest membrane hydrogen bonds deliver rich results

Tekijä Grigoryan, Gevorg, DeGrado, William F
Julkaistu 2008

Probing Designability via a Generalized Model of Helical Bundle Geometry

Tekijä Grigoryan, Gevorg, DeGrado, William F.
Julkaistu 2010

Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

Tekijä Holland, Jack, Pan, Qinxin, Grigoryan, Gevorg
Julkaisussa PLoS One (2018)

Structure-based design of combinatorial mutagenesis libraries

Tekijä Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Julkaisussa Protein Sci (2015)

Tertiary alphabet for the observable protein structural universe

Tekijä Mackenzie, Craig O., Zhou, Jianfu, Grigoryan, Gevorg
Julkaisussa Proc Natl Acad Sci U S A (2016)

A general-purpose protein design framework based on mining sequence–structure relationships in known protein structures

Tekijä Zhou, Jianfu, Panaitiu, Alexandra E., Grigoryan, Gevorg
Julkaisussa Proc Natl Acad Sci U S A (2020)

Pareto optimization of combinatorial mutagenesis libraries

Tekijä Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Julkaisussa IEEE/ACM Trans Comput Biol Bioinform (2018)

Design of protein-interaction specificity affords selective bZIP-binding peptides

Tekijä Grigoryan, Gevorg, Reinke, Aaron W., Keating, Amy E.
Julkaistu 2009

Identification of bZIP interaction partners of viral proteins HBZ, MEQ, BZLF1, and K-bZIP using coiled-coil arrays

Tekijä Reinke, Aaron W., Grigoryan, Gevorg, Keating, Amy E.
Julkaistu 2010

Transmembrane Communication: General Principles and Lessons from the Structure and Function of the M2 Proton Channel, K(+) Channels, and Integrin Receptors

Tekijä Grigoryan, Gevorg, Moore, David T., DeGrado, William F.
Julkaistu 2011

The accommodation index measures the perturbation associated with insertions and deletions in coiled‐coils: Application to understand signaling in histidine kinases

Tekijä Schmidt, Nathan W., Grigoryan, Gevorg, DeGrado, William F.
Julkaisussa Protein Sci (2017)

Design of self-assembling transmembrane helical bundles to elucidate principles required for membrane protein folding and ion transport

Tekijä Joh, Nathan H., Grigoryan, Gevorg, Wu, Yibing, DeGrado, William F.
Julkaisussa Philos Trans R Soc Lond B Biol Sci (2017)

Tertiary structural motif sequence statistics enable facile prediction and design of peptides that bind anti-apoptotic Bfl-1 and Mcl-1

Tekijä Frappier, Vincent, Jenson, Justin M., Zhou, Jianfu, Grigoryan, Gevorg, Keating, Amy E.
Julkaisussa Structure (2019)

Deletion of Na(+)/H(+) exchanger regulatory factor 2 represses colon cancer progress by suppression of Stat3 and CD24

Tekijä Yoshida, Michihiro, Zhao, Luqing, Grigoryan, Gevorg, Shim, Hyunsuk, He, Peijian, Yun, C. Chris
Julkaisussa Am J Physiol Gastrointest Liver Physiol (2016)

Computational Design of Selective Peptides to Discriminate Between Similar PDZ Domains in an Oncogenic Pathway

Tekijä Zheng, Fan, Jewell, Heather, Fitzpatrick, Jeremy, Zhang, Jian, Mierke, Dale F., Grigoryan, Gevorg
Julkaisussa J Mol Biol (2014)