Mining Tertiary Structural Motifs for Assessment of Designability

ανά Zhang, Jian, Grigoryan, Gevorg
Τόπος έκδοσης Methods Enzymol (2013)

Rapid search for tertiary fragments reveals protein sequence–structure relationships

ανά Zhou, Jianfu, Grigoryan, Gevorg
Τόπος έκδοσης Protein Sci (2015)

Sequence statistics of tertiary structural motifs reflect protein stability

ανά Zheng, Fan, Grigoryan, Gevorg
Τόπος έκδοσης PLoS One (2017)

Structural specificity in coiled-coil interactions

ανά Grigoryan, Gevorg, Keating, Amy E.
Έκδοση 2008

Protein Structural Motifs in Prediction and Design

ανά Mackenzie, Craig O., Grigoryan, Gevorg
Τόπος έκδοσης Curr Opin Struct Biol (2017)

Modest membrane hydrogen bonds deliver rich results

ανά Grigoryan, Gevorg, DeGrado, William F
Έκδοση 2008

Probing Designability via a Generalized Model of Helical Bundle Geometry

ανά Grigoryan, Gevorg, DeGrado, William F.
Έκδοση 2010

Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

ανά Holland, Jack, Pan, Qinxin, Grigoryan, Gevorg
Τόπος έκδοσης PLoS One (2018)

Structure-based design of combinatorial mutagenesis libraries

ανά Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Τόπος έκδοσης Protein Sci (2015)

Tertiary alphabet for the observable protein structural universe

ανά Mackenzie, Craig O., Zhou, Jianfu, Grigoryan, Gevorg
Τόπος έκδοσης Proc Natl Acad Sci U S A (2016)

A general-purpose protein design framework based on mining sequence–structure relationships in known protein structures

ανά Zhou, Jianfu, Panaitiu, Alexandra E., Grigoryan, Gevorg
Τόπος έκδοσης Proc Natl Acad Sci U S A (2020)

Pareto optimization of combinatorial mutagenesis libraries

ανά Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Τόπος έκδοσης IEEE/ACM Trans Comput Biol Bioinform (2018)

Design of protein-interaction specificity affords selective bZIP-binding peptides

ανά Grigoryan, Gevorg, Reinke, Aaron W., Keating, Amy E.
Έκδοση 2009

Identification of bZIP interaction partners of viral proteins HBZ, MEQ, BZLF1, and K-bZIP using coiled-coil arrays

ανά Reinke, Aaron W., Grigoryan, Gevorg, Keating, Amy E.
Έκδοση 2010

Transmembrane Communication: General Principles and Lessons from the Structure and Function of the M2 Proton Channel, K(+) Channels, and Integrin Receptors

ανά Grigoryan, Gevorg, Moore, David T., DeGrado, William F.
Έκδοση 2011

The accommodation index measures the perturbation associated with insertions and deletions in coiled‐coils: Application to understand signaling in histidine kinases

ανά Schmidt, Nathan W., Grigoryan, Gevorg, DeGrado, William F.
Τόπος έκδοσης Protein Sci (2017)

Design of self-assembling transmembrane helical bundles to elucidate principles required for membrane protein folding and ion transport

ανά Joh, Nathan H., Grigoryan, Gevorg, Wu, Yibing, DeGrado, William F.
Τόπος έκδοσης Philos Trans R Soc Lond B Biol Sci (2017)

Tertiary structural motif sequence statistics enable facile prediction and design of peptides that bind anti-apoptotic Bfl-1 and Mcl-1

ανά Frappier, Vincent, Jenson, Justin M., Zhou, Jianfu, Grigoryan, Gevorg, Keating, Amy E.
Τόπος έκδοσης Structure (2019)

Deletion of Na(+)/H(+) exchanger regulatory factor 2 represses colon cancer progress by suppression of Stat3 and CD24

ανά Yoshida, Michihiro, Zhao, Luqing, Grigoryan, Gevorg, Shim, Hyunsuk, He, Peijian, Yun, C. Chris
Τόπος έκδοσης Am J Physiol Gastrointest Liver Physiol (2016)

Computational Design of Selective Peptides to Discriminate Between Similar PDZ Domains in an Oncogenic Pathway

ανά Zheng, Fan, Jewell, Heather, Fitzpatrick, Jeremy, Zhang, Jian, Mierke, Dale F., Grigoryan, Gevorg
Τόπος έκδοσης J Mol Biol (2014)