Mining Tertiary Structural Motifs for Assessment of Designability

af Zhang, Jian, Grigoryan, Gevorg
Udgivet i Methods Enzymol (2013)

Rapid search for tertiary fragments reveals protein sequence–structure relationships

af Zhou, Jianfu, Grigoryan, Gevorg
Udgivet i Protein Sci (2015)

Sequence statistics of tertiary structural motifs reflect protein stability

af Zheng, Fan, Grigoryan, Gevorg
Udgivet i PLoS One (2017)

Structural specificity in coiled-coil interactions

af Grigoryan, Gevorg, Keating, Amy E.
Udgivet 2008

Protein Structural Motifs in Prediction and Design

af Mackenzie, Craig O., Grigoryan, Gevorg
Udgivet i Curr Opin Struct Biol (2017)

Modest membrane hydrogen bonds deliver rich results

af Grigoryan, Gevorg, DeGrado, William F
Udgivet 2008

Probing Designability via a Generalized Model of Helical Bundle Geometry

af Grigoryan, Gevorg, DeGrado, William F.
Udgivet 2010

Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

af Holland, Jack, Pan, Qinxin, Grigoryan, Gevorg
Udgivet i PLoS One (2018)

Structure-based design of combinatorial mutagenesis libraries

af Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Udgivet i Protein Sci (2015)

Tertiary alphabet for the observable protein structural universe

af Mackenzie, Craig O., Zhou, Jianfu, Grigoryan, Gevorg
Udgivet i Proc Natl Acad Sci U S A (2016)

A general-purpose protein design framework based on mining sequence–structure relationships in known protein structures

af Zhou, Jianfu, Panaitiu, Alexandra E., Grigoryan, Gevorg
Udgivet i Proc Natl Acad Sci U S A (2020)

Pareto optimization of combinatorial mutagenesis libraries

af Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Udgivet i IEEE/ACM Trans Comput Biol Bioinform (2018)

Design of protein-interaction specificity affords selective bZIP-binding peptides

af Grigoryan, Gevorg, Reinke, Aaron W., Keating, Amy E.
Udgivet 2009

Identification of bZIP interaction partners of viral proteins HBZ, MEQ, BZLF1, and K-bZIP using coiled-coil arrays

af Reinke, Aaron W., Grigoryan, Gevorg, Keating, Amy E.
Udgivet 2010

Transmembrane Communication: General Principles and Lessons from the Structure and Function of the M2 Proton Channel, K(+) Channels, and Integrin Receptors

af Grigoryan, Gevorg, Moore, David T., DeGrado, William F.
Udgivet 2011

The accommodation index measures the perturbation associated with insertions and deletions in coiled‐coils: Application to understand signaling in histidine kinases

af Schmidt, Nathan W., Grigoryan, Gevorg, DeGrado, William F.
Udgivet i Protein Sci (2017)

Design of self-assembling transmembrane helical bundles to elucidate principles required for membrane protein folding and ion transport

af Joh, Nathan H., Grigoryan, Gevorg, Wu, Yibing, DeGrado, William F.
Udgivet i Philos Trans R Soc Lond B Biol Sci (2017)

Tertiary structural motif sequence statistics enable facile prediction and design of peptides that bind anti-apoptotic Bfl-1 and Mcl-1

af Frappier, Vincent, Jenson, Justin M., Zhou, Jianfu, Grigoryan, Gevorg, Keating, Amy E.
Udgivet i Structure (2019)

Deletion of Na(+)/H(+) exchanger regulatory factor 2 represses colon cancer progress by suppression of Stat3 and CD24

af Yoshida, Michihiro, Zhao, Luqing, Grigoryan, Gevorg, Shim, Hyunsuk, He, Peijian, Yun, C. Chris
Udgivet i Am J Physiol Gastrointest Liver Physiol (2016)

Computational Design of Selective Peptides to Discriminate Between Similar PDZ Domains in an Oncogenic Pathway

af Zheng, Fan, Jewell, Heather, Fitzpatrick, Jeremy, Zhang, Jian, Mierke, Dale F., Grigoryan, Gevorg
Udgivet i J Mol Biol (2014)