Mining Tertiary Structural Motifs for Assessment of Designability

Autor Zhang, Jian, Grigoryan, Gevorg
Vydáno v Methods Enzymol (2013)

Rapid search for tertiary fragments reveals protein sequence–structure relationships

Autor Zhou, Jianfu, Grigoryan, Gevorg
Vydáno v Protein Sci (2015)

Sequence statistics of tertiary structural motifs reflect protein stability

Autor Zheng, Fan, Grigoryan, Gevorg
Vydáno v PLoS One (2017)

Structural specificity in coiled-coil interactions

Autor Grigoryan, Gevorg, Keating, Amy E.
Vydáno 2008

Protein Structural Motifs in Prediction and Design

Autor Mackenzie, Craig O., Grigoryan, Gevorg
Vydáno v Curr Opin Struct Biol (2017)

Modest membrane hydrogen bonds deliver rich results

Autor Grigoryan, Gevorg, DeGrado, William F
Vydáno 2008

Probing Designability via a Generalized Model of Helical Bundle Geometry

Autor Grigoryan, Gevorg, DeGrado, William F.
Vydáno 2010

Contact prediction is hardest for the most informative contacts, but improves with the incorporation of contact potentials

Autor Holland, Jack, Pan, Qinxin, Grigoryan, Gevorg
Vydáno v PLoS One (2018)

Structure-based design of combinatorial mutagenesis libraries

Autor Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Vydáno v Protein Sci (2015)

Tertiary alphabet for the observable protein structural universe

Autor Mackenzie, Craig O., Zhou, Jianfu, Grigoryan, Gevorg
Vydáno v Proc Natl Acad Sci U S A (2016)

A general-purpose protein design framework based on mining sequence–structure relationships in known protein structures

Autor Zhou, Jianfu, Panaitiu, Alexandra E., Grigoryan, Gevorg
Vydáno v Proc Natl Acad Sci U S A (2020)

Pareto optimization of combinatorial mutagenesis libraries

Autor Verma, Deeptak, Grigoryan, Gevorg, Bailey-Kellogg, Chris
Vydáno v IEEE/ACM Trans Comput Biol Bioinform (2018)

Design of protein-interaction specificity affords selective bZIP-binding peptides

Autor Grigoryan, Gevorg, Reinke, Aaron W., Keating, Amy E.
Vydáno 2009

Identification of bZIP interaction partners of viral proteins HBZ, MEQ, BZLF1, and K-bZIP using coiled-coil arrays

Autor Reinke, Aaron W., Grigoryan, Gevorg, Keating, Amy E.
Vydáno 2010

Transmembrane Communication: General Principles and Lessons from the Structure and Function of the M2 Proton Channel, K(+) Channels, and Integrin Receptors

Autor Grigoryan, Gevorg, Moore, David T., DeGrado, William F.
Vydáno 2011

The accommodation index measures the perturbation associated with insertions and deletions in coiled‐coils: Application to understand signaling in histidine kinases

Autor Schmidt, Nathan W., Grigoryan, Gevorg, DeGrado, William F.
Vydáno v Protein Sci (2017)

Design of self-assembling transmembrane helical bundles to elucidate principles required for membrane protein folding and ion transport

Autor Joh, Nathan H., Grigoryan, Gevorg, Wu, Yibing, DeGrado, William F.
Vydáno v Philos Trans R Soc Lond B Biol Sci (2017)

Tertiary structural motif sequence statistics enable facile prediction and design of peptides that bind anti-apoptotic Bfl-1 and Mcl-1

Autor Frappier, Vincent, Jenson, Justin M., Zhou, Jianfu, Grigoryan, Gevorg, Keating, Amy E.
Vydáno v Structure (2019)

Deletion of Na(+)/H(+) exchanger regulatory factor 2 represses colon cancer progress by suppression of Stat3 and CD24

Autor Yoshida, Michihiro, Zhao, Luqing, Grigoryan, Gevorg, Shim, Hyunsuk, He, Peijian, Yun, C. Chris
Vydáno v Am J Physiol Gastrointest Liver Physiol (2016)

Computational Design of Selective Peptides to Discriminate Between Similar PDZ Domains in an Oncogenic Pathway

Autor Zheng, Fan, Jewell, Heather, Fitzpatrick, Jeremy, Zhang, Jian, Mierke, Dale F., Grigoryan, Gevorg
Vydáno v J Mol Biol (2014)