Hi-C analysis: from data generation to integration

od Pal, Koustav, Forcato, Mattia, Ferrari, Francesco
izdano v Biophys Rev (2018)

Computational methods for the integrative analysis of single-cell data

od Forcato, Mattia, Romano, Oriana, Bicciato, Silvio
izdano v Brief Bioinform (2020)

GDA, a web-based tool for Genomics and Drugs integrated analysis

od Caroli, Jimmy, Sorrentino, Giovanni, Forcato, Mattia, Del Sal, Giannino, Bicciato, Silvio
izdano v Nucleic Acids Res (2018)

Comparison of computational methods for Hi-C data analysis

od Forcato, Mattia, Nicoletti, Chiara, Pal, Koustav, Livi, Carmen Maria, Ferrari, Francesco, Bicciato, Silvio
izdano v Nat Methods (2017)

A multifactorial ‘Consensus Signature’ by in silico analysis to predict response to neoadjuvant anthracycline-based chemotherapy in triple-negative breast cancer

od Turner, Natalie, Forcato, Mattia, Nuzzo, Simona, Malorni, Luca, Bicciato, Silvio, Di Leo, Angelo
izdano v NPJ Breast Cancer (2015)

Dynamic Effects of Topoisomerase I Inhibition on R-Loops and Short Transcripts at Active Promoters

od Marinello, Jessica, Bertoncini, Stefania, Aloisi, Iris, Cristini, Agnese, Malagoli Tagliazucchi, Guidantonio, Forcato, Mattia, Sordet, Olivier, Capranico, Giovanni
izdano v PLoS One (2016)

Genome-wide association between YAP/TAZ/TEAD and AP-1 at enhancers drives oncogenic growth

od Zanconato, Francesca, Forcato, Mattia, Battilana, Giusy, Azzolin, Luca, Quaranta, Erika, Bodega, Beatrice, Rosato, Antonio, Bicciato, Silvio, Cordenonsi, Michelangelo, Piccolo, Stefano
izdano v Nat Cell Biol (2015)

Transcriptional profiling of human bronchial epithelial cell BEAS-2B exposed to diesel and biomass ultrafine particles

od Grilli, Andrea, Bengalli, Rossella, Longhin, Eleonora, Capasso, Laura, Proverbio, Maria Carla, Forcato, Mattia, Bicciato, Silvio, Gualtieri, Maurizio, Battaglia, Cristina, Camatini, Marina
izdano v BMC Genomics (2018)

ETV7 regulates breast cancer stem-like cell features by repressing IFN-response genes

od Pezzè, Laura, Meškytė, Erna Marija, Forcato, Mattia, Pontalti, Stefano, Badowska, Kalina Aleksandra, Rizzotto, Dario, Skvortsova, Ira-Ida, Bicciato, Silvio, Ciribilli, Yari
izdano v Cell Death Dis (2021)

Global chromatin conformation differences in the Drosophila dosage compensated chromosome X

od Pal, Koustav, Forcato, Mattia, Jost, Daniel, Sexton, Thomas, Vaillant, Cédric, Salviato, Elisa, Mazza, Emilia Maria Cristina, Lugli, Enrico, Cavalli, Giacomo, Ferrari, Francesco
izdano v Nat Commun (2019)

The transcriptional regulator ZNF398 mediates pluripotency and epithelial character downstream of TGF-beta in human PSCs

od Zorzan, Irene, Pellegrini, Marco, Arboit, Mattia, Incarnato, Danny, Maldotti, Mara, Forcato, Mattia, Tagliazucchi, Guidantonio Malagoli, Carbognin, Elena, Montagner, Marco, Oliviero, Salvatore, Martello, Graziano
izdano v Nat Commun (2020)

Aerobic glycolysis tunes YAP/TAZ transcriptional activity

od Enzo, Elena, Santinon, Giulia, Pocaterra, Arianna, Aragona, Mariaceleste, Bresolin, Silvia, Forcato, Mattia, Grifoni, Daniela, Pession, Annalisa, Zanconato, Francesca, Guzzo, Giulia, Bicciato, Silvio, Dupont, Sirio
izdano v EMBO J (2015)

EphB6 Regulates TFEB-Lysosomal Pathway and Survival of Disseminated Indolent Breast Cancer Cells

od Zangrossi, Manuela, Romani, Patrizia, Chakravarty, Probir, Ratcliffe, Colin D.H., Hooper, Steven, Dori, Martina, Forcato, Mattia, Bicciato, Silvio, Dupont, Sirio, Sahai, Erik, Montagner, Marco
izdano v Cancers (Basel) (2021)

MCM7 and its hosted miR-25, 93 and 106b cluster elicit YAP/TAZ oncogenic activity in lung cancer

od Lo Sardo, Federica, Forcato, Mattia, Sacconi, Andrea, Capaci, Valeria, Zanconato, Francesca, Di Agostino, Silvia, Del Sal, Giannino, Pandolfi, Pier Paolo, Strano, Sabrina, Bicciato, Silvio, Blandino, Giovanni
izdano v Carcinogenesis (2017)

Hmgb3 Is Regulated by MicroRNA-206 during Muscle Regeneration

od Maciotta, Simona, Meregalli, Mirella, Cassinelli, Letizia, Parolini, Daniele, Farini, Andrea, Fraro, Giulia Del, Gandolfi, Francesco, Forcato, Mattia, Ferrari, Sergio, Gabellini, Davide, Bicciato, Silvio, Cossu, Giulio, Torrente, Yvan
Izdano 2012

Glucocorticoid receptor signalling activates YAP in breast cancer

od Sorrentino, Giovanni, Ruggeri, Naomi, Zannini, Alessandro, Ingallina, Eleonora, Bertolio, Rebecca, Marotta, Carolina, Neri, Carmelo, Cappuzzello, Elisa, Forcato, Mattia, Rosato, Antonio, Mano, Miguel, Bicciato, Silvio, Del Sal, Giannino
izdano v Nat Commun (2017)

The calcineurin-NFAT pathway controls activity-dependent circadian gene expression in slow skeletal muscle

od Dyar, Kenneth A., Ciciliot, Stefano, Tagliazucchi, Guidantonio Malagoli, Pallafacchina, Giorgia, Tothova, Jana, Argentini, Carla, Agatea, Lisa, Abraham, Reimar, Ahdesmäki, Miika, Forcato, Mattia, Bicciato, Silvio, Schiaffino, Stefano, Blaauw, Bert
izdano v Mol Metab (2015)

Unravelling Heterogeneity of Amplified Human Amniotic Fluid Stem Cells Sub-Populations

od Casciaro, Francesca, Zia, Silvia, Forcato, Mattia, Zavatti, Manuela, Beretti, Francesca, Bertucci, Emma, Zattoni, Andrea, Reschiglian, Pierluigi, Alviano, Francesco, Bonsi, Laura, Follo, Matilde Yung, Demaria, Marco, Roda, Barbara, Maraldi, Tullia
izdano v Cells (2021)

Single-keratinocyte transcriptomic analyses identify different clonal types and proliferative potential mediated by FOXM1 in human epidermal stem cells

od Enzo, Elena, Secone Seconetti, Alessia, Forcato, Mattia, Tenedini, Elena, Polito, Maria Pia, Sala, Irene, Carulli, Sonia, Contin, Roberta, Peano, Clelia, Tagliafico, Enrico, Bicciato, Silvio, Bondanza, Sergio, De Luca, Michele
izdano v Nat Commun (2021)

The mutant p53‐ID4 complex controls VEGFA isoforms by recruiting lncRNA MALAT1

od Pruszko, Magdalena, Milano, Elisa, Forcato, Mattia, Donzelli, Sara, Ganci, Federica, Di Agostino, Silvia, De Panfilis, Simone, Fazi, Francesco, Bates, David O, Bicciato, Silvio, Zylicz, Maciej, Zylicz, Alicja, Blandino, Giovanni, Fontemaggi, Giulia
izdano v EMBO Rep (2017)