Impact of new sequencing technologies on studies of the human B cell repertoire

por Finn, Jessica A., Crowe, James E.
Publicado 2013

Transposon Tn7 Directs Transposition into the Genome of Filamentous Bacteriophage M13 Using the Element-Encoded TnsE Protein

por Finn, Jessica A., Parks, Adam R., Peters, Joseph E.
Publicado 2007

Tissue-Specific Expressed Antibody Variable Gene Repertoires

por Briney, Bryan S., Willis, Jordan R., Finn, Jessica A., McKinney, Brett A., Crowe, James E.
Publicado 2014

Structural Diversity of Ultralong CDRH3s in Seven Bovine Antibody Heavy Chains

por Dong, Jinhui, Finn, Jessica A., Larsen, Peter A., Smith, Timothy P. L., Crowe, James E.
Publicado en Front Immunol (2019)

Correction: Tissue-Specific Expressed Antibody Variable Gene Repertoires

por Briney, Bryan S., Willis, Jordan R., Finn, Jessica A., McKinney, Brett A., Crowe, James E.
Publicado en PLoS One (2020)

Improving Loop Modeling of the Antibody Complementarity-Determining Region 3 Using Knowledge-Based Restraints

por Finn, Jessica A., Koehler Leman, Julia, Willis, Jordan R., Cisneros, Alberto, Crowe, James E., Meiler, Jens
Publicado en PLoS One (2016)

High frequency of shared clonotypes in human B cell receptor repertoires

por Soto, Cinque, Bombardi, Robin G., Branchizio, Andre, Kose, Nurgun, Matta, Pranathi, Sevy, Alexander M., Sinkovits, Robert S., Gilchuk, Pavlo, Finn, Jessica A., Crowe, James E.
Publicado en Nature (2019)

PyIR: a scalable wrapper for processing billions of immunoglobulin and T cell receptor sequences using IgBLAST

por Soto, Cinque, Finn, Jessica A., Willis, Jordan R., Day, Samuel B., Sinkovits, Robert S., Jones, Taylor, Schmitz, Samuel, Meiler, Jens, Branchizio, Andre, Crowe, James E.
Publicado en BMC Bioinformatics (2020)

Long antibody HCDR3s from HIV-naïve donors presented on a PG9 neutralizing antibody background mediate HIV neutralization

por Willis, Jordan R., Finn, Jessica A., Briney, Bryan, Sapparapu, Gopal, Singh, Vidisha, King, Hannah, LaBranche, Celia C., Montefiori, David C., Meiler, Jens, Crowe, James E.
Publicado en Proc Natl Acad Sci U S A (2016)

Identification of structurally related antibodies in antibody sequence databases using Rosetta-derived position-specific scoring

por Finn, Jessica A., Dong, Jinhui, Sevy, Alexander M., Parrish, Erica, Gilchuk, Iuliia, Nargi, Rachel, Scarlett-Jones, Morgan, Reichard, Walter, Bombardi, Robin, Voss, Thomas G., Meiler, Jens, Crowe, James E.
Publicado en Structure (2020)

Protocols for Molecular Modeling with Rosetta3 and RosettaScripts

por Bender, Brian J., Cisneros, Alberto, Duran, Amanda M., Finn, Jessica A., Fu, Darwin, Lokits, Alyssa D., Mueller, Benjamin K., Sangha, Amandeep K., Sauer, Marion F., Sevy, Alexander M., Sliwoski, Gregory, Sheehan, Jonathan H., DiMaio, Frank, Meiler, Jens, Moretti, Rocco
Publicado en Biochemistry (2016)

A site of vulnerability on the influenza virus hemagglutinin head domain trimer interface

por Bangaru, Sandhya, Lang, Shanshan, Schotsaert, Michael, Vanderven, Hillary A., Zhu, Xueyong, Kose, Nurgun, Bombardi, Robin, Finn, Jessica A, Kent, Stephen J., Gilchuk, Pavlo, Gilchuk, Iuliia, Turner, Hannah L., García-Sastre, Adolfo, Li, Sheng, Ward, Andrew B., Wilson, Ian A., Crowe, James E.
Publicado en Cell (2019)

Recognition of influenza H3N2 variant virus by human neutralizing antibodies

por Bangaru, Sandhya, Nieusma, Travis, Kose, Nurgun, Thornburg, Natalie J., Finn, Jessica A., Kaplan, Bryan S., King, Hannah G., Singh, Vidisha, Lampley, Rebecca M., Sapparapu, Gopal, Cisneros, Alberto, Edwards, Kathryn M., Slaughter, James C., Edupuganti, Srilatha, Lai, Lilin, Richt, Juergen A., Webby, Richard J., Ward, Andrew B., Crowe, James E.
Publicado en JCI Insight (2016)

Structural basis for nonneutralizing antibody competition at antigenic site II of the respiratory syncytial virus fusion protein

por Mousa, Jarrod J., Sauer, Marion F., Sevy, Alexander M., Finn, Jessica A., Bates, John T., Alvarado, Gabriela, King, Hannah G., Loerinc, Leah B., Fong, Rachel H., Doranz, Benjamin J., Correia, Bruno E., Kalyuzhniy, Oleksandr, Wen, Xiaolin, Jardetzky, Theodore S., Schief, William R., Ohi, Melanie D., Meiler, Jens, Crowe, James E.
Publicado en Proc Natl Acad Sci U S A (2016)

Canonical features of human antibodies recognizing the influenza hemagglutinin trimer interface

por Zost, Seth J., Dong, Jinhui, Gilchuk, Iuliia M., Gilchuk, Pavlo, Thornburg, Natalie J., Bangaru, Sandhya, Kose, Nurgun, Finn, Jessica A., Bombardi, Robin, Soto, Cinque, Chen, Elaine C., Nargi, Rachel S., Sutton, Rachel E., Irving, Ryan P., Suryadevara, Naveenchandra, Westover, Jonna B., Carnahan, Robert H., Turner, Hannah L., Li, Sheng, Ward, Andrew B., Crowe, James E.
Publicado en J Clin Invest (2021)

Modeling Immunity with Rosetta: Methods for Antibody and Antigen Design

por Schoeder, Clara T., Schmitz, Samuel, Adolf-Bryfogle, Jared, Sevy, Alexander M., Finn, Jessica A., Sauer, Marion F., Bozhanova, Nina G., Mueller, Benjamin K., Sangha, Amandeep K., Bonet, Jaume, Sheehan, Jonathan H., Kuenze, Georg, Marlow, Brennica, Smith, Shannon T., Woods, Hope, Bender, Brian J., Martina, Cristina E., del Alamo, Diego, Kodali, Pranav, Gulsevin, Alican, Schief, William R., Correia, Bruno E., Crowe, James E., Meiler, Jens, Moretti, Rocco
Publicado en Biochemistry (2021)