Tools for Building, Analyzing and Evaluating HLA Haplotypes from Families

door Osoegawa, Kazutoyo, Mack, Steven J., Prestegaard, Matthew, Fernández-Viña, Marcelo A.
Gepubliceerd in Hum Immunol (2019)

Complete nucleotide sequence characterization of DRB5 alleles reveals a homogeneous allele group that is distinct from other DRB genes

door Barsakis, Konstantinos, Babrzadeh, Farbod, Chi, Anjo, Mallempati, Kalyan, Pickle, William, Mindrinos, Michael, Fernández-Viña, Marcelo A.
Gepubliceerd in Hum Immunol (2019)

Deconstruction of HLA-DRB1*04:01:01 and HLA-DRB1*15:01:01 class II haplotypes using next generation sequencing in European Americans with multiple sclerosis.

door Creary, Lisa E., Mallempati, Kalyan C., Gangavarapu, Sridevi, Caillier, Stacy J., Oksenberg, Jorge R., Fernández-Viňa, Marcelo A.
Gepubliceerd in Mult Scler (2018)

HLA Amino Acid Polymorphisms and Kidney Allograft Survival

door Kamoun, Malek, McCullough, Keith P., Maiers, Martin, Fernandez Vina, Marcelo A., Li, Hongzhe, Teal, Valerie, Leichtman, Alan B., Merion, Robert M.
Gepubliceerd in Transplantation (2017)

Association of Human Leukocyte Antigens Class II Variants with Susceptibility to Hidradenitis Suppurativa in a Caucasian Spanish Population

door Ocejo-Vinyals, J. Gonzalo, Gonzalez-Gay, Miguel A., Fernández-Viña, Marcelo A., Cantos-Mansilla, Juan, Vilanova, Iosune, Blanco, Ricardo, González-López, Marcos A.
Gepubliceerd in J Clin Med (2020)

Next-Generation Sequencing reveals new information about HLA allele and haplotype diversity in a large European American population

door Creary, Lisa E., Gangavarapu, Sridevi, Mallempati, Kalyan C., Montero-Martín, Gonzalo, Caillier, Stacy J., Santaniello, Adam, Hollenbach, Jill A., Oksenberg, Jorge R., Fernández-Viňa, Marcelo A.
Gepubliceerd in Hum Immunol (2019)

High-throughput, high-fidelity HLA genotyping with deep sequencing

door Wang, Chunlin, Krishnakumar, Sujatha, Wilhelmy, Julie, Babrzadeh, Farbod, Stepanyan, Lilit, Su, Laura F., Levinson, Douglas, Fernandez-Viña, Marcelo A., Davis, Ronald W., Davis, Mark M., Mindrinos, Michael
Gepubliceerd in 2012

Cytotoxic T-Lymphocyte Antigen-4 (CTLA-4) Single Nucleotide Polymorphisms Are Not Associated with Outcomes after Unrelated Donor Transplant: A Center for International Blood and Ma...

door Sengsayadeth, Salyka, Wang, Tao, Lee, Stephanie J., Haagenson, Michael D., Spellman, Stephen, Fernandez Viña, Marcelo A., Muller, Carlheinz R., Verneris, Michael R., Savani, Bipin N., Jagasia, Madan
Gepubliceerd in 2014

HLA-A2 Supertype-Restricted Cell-Mediated Immunity by Peripheral Blood Mononuclear Cells Derived from Malian Children with Severe or Uncomplicated Plasmodium falciparum Malaria and...

door Lyke, Kirsten E., Burges, Robin B., Cissoko, Yacouba, Sangare, Lansana, Kone, Abdoulaye, Dao, Modibo, Diarra, Issa, Fernández-Viňa, Marcelo A., Plowe, Christopher V., Doumbo, Ogobara K., Sztein, Marcelo B.
Gepubliceerd in 2005

Recommendations for Donor HLA Assessment and Matching for Allogeneic Stem Cell Transplantation: Consensus Opinion of the Blood and Marrow Transplant Clinical Trials Network (BMT CT...

door Howard, Alan, Fernandez-Vina, Marcelo A., Appelbaum, Frederick R., Confer, Dennis L., Devine, Steven M., Horowitz, Mary M., Mendizabal, Adam, Laport, Ginna G., Pasquini, Marcelo C., Spellman, Stephen R.
Gepubliceerd in Biol Blood Marrow Transplant (2014)

High Resolution Haplotype Analyses of Classical HLA Genes in Families With Multiple Sclerosis Highlights the Role of HLA-DP Alleles in Disease Susceptibility

door Osoegawa, Kazutoyo, Creary, Lisa E., Montero-Martín, Gonzalo, Mallempati, Kalyan C., Gangavarapu, Sridevi, Caillier, Stacy J., Santaniello, Adam, Isobe, Noriko, Hollenbach, Jill A., Hauser, Stephen L., Oksenberg, Jorge R., Fernández-Viňa, Marcelo A.
Gepubliceerd in Front Immunol (2021)

HLA-Mismatch Is Associated With Worse Outcomes After Unrelated Donor Reduced Intensity Conditioning Hematopoietic Cell Transplantation: An Analysis From The CIBMTR

door Verneris, Michael R., Lee, Stephanie J., Ahn, Kwang Woo, Wang, Hai-Lin, Battiwalla, Minoo, Inamoto, Yoshihiro, Fernandez-Vina, Marcelo A., Gajewski, James, Pidala, Joseph, Munker, Reinhold, Aljurf, Mahmoud, Saber, Wael, Spellman, Stephen, Koreth, John
Gepubliceerd in Biol Blood Marrow Transplant (2015)

17th IHIW component “Immunogenetics of Ageing” – New NGS data

door Ivanova, Milena, Creary, Lisa E., Hadra, Bushra Al, Lukanov, Tsvetelin, Mazzocco, Michela, Sacchi, Nicoletta, Ameen, Reem, Al-Shemmari, Salem, Moise, Ana, Ursu, Larisa Denisa, Constantinescu, Ileana, Vayntrub, Tamara, Fernández-Viňa, Marcelo A., Shivarov, Velizar, Naumova, Elissaveta
Gepubliceerd in Hum Immunol (2019)

High-Resolution Characterization of KIR Genes in a Large North American Cohort Reveals Novel Details of Structural and Sequence Diversity

door Amorim, Leonardo M., Augusto, Danillo G., Nemat-Gorgani, Neda, Montero-Martin, Gonzalo, Marin, Wesley M., Shams, Hengameh, Dandekar, Ravi, Caillier, Stacy, Parham, Peter, Fernández-Viña, Marcelo A., Oksenberg, Jorge R., Norman, Paul J., Hollenbach, Jill A.
Gepubliceerd in Front Immunol (2021)

Allelic resolution NGS HLA typing of Class I and Class II loci and haplotypes in Cape Town, South Africa

door Thorstenson, Yvonne R., Creary, Lisa E., Huang, Huang, Rozot, Virginie, Nguyen, Tracy T., Babrzadeh, Farbod, Kancharla, Sandeep, Fukushima, Marilyn, Kuehn, Raquel, Wang, Chunlin, Li, Ming, Krishnakumar, Sujatha, Mindrinos, Michael, Fernandez Viña, Marcelo A., Scriba, Thomas J., Davis, Mark M.
Gepubliceerd in Hum Immunol (2018)

Mixed chimerism and acceptance of kidney transplants after immunosuppressive drug withdrawal

door Busque, Stephan, Scandling, John D., Lowsky, Robert, Shizuru, Judith, Jensen, Kent, Waters, Jeffrey, Wu, Hsin-Hsu, Sheehan, Kevin, Shori, Asha, Choi, Okmi, Pham, Thomas, Fernandez Vina, Marcelo A., Hoppe, Richard, Tamaresis, John, Lavori, Philip, Engleman, Edgar G., Meyer, Everett, Strober, Samuel
Gepubliceerd in Sci Transl Med (2020)

Next-Generation Sequencing Identifies Extended HLA Class I and II Haplotypes Associated With Early-Onset and Late-Onset Myasthenia Gravis in Italian, Norwegian, and Swedish Populat...

door Creary, Lisa E., Gangavarapu, Sridevi, Caillier, Stacy J., Cavalcante, Paola, Frangiamore, Rita, Lie, Benedicte A., Bengtsson, Mats, Harbo, Hanne Flinstad, Brauner, Susanna, Hollenbach, Jill A., Oksenberg, Jorge R., Bernasconi, Pia, Maniaol, Angelina Hatlø, Hammarström, Lennart, Mantegazza, Renato, Fernández-Viña, Marcelo A.
Gepubliceerd in Front Immunol (2021)

HLA Alleles and Haplotypes Observed in 263 US Families

door Osoegawa, Kazutoyo, Mallempati, Kalyan C., Gangavarapu, Sridevi, Oki, Arisa, Gendzekhadze, Ketevan, Marino, Susana R., Brown, Nicholas K., Bettinotti, Maria P., Weimer, Eric T., Montero-Martín, Gonzalo, Creary, Lisa E., Vayntrub, Tamara A., Chang, Chia-Jung, Askar, Medhat, Mack, Steven J., Fernández-Viña, Marcelo A.
Gepubliceerd in Hum Immunol (2019)

Multiple mismatches at the low expression HLA loci DP, DQ, and DRB3/4/5 associate with adverse outcomes in hematopoietic stem cell transplantation

door Fernández-Viña, Marcelo A., Klein, John P., Haagenson, Michael, Spellman, Stephen R., Anasetti, Claudio, Noreen, Harriet, Baxter-Lowe, Lee Ann, Cano, Pedro, Flomenberg, Neal, Confer, Dennis L., Horowitz, Mary M., Oudshoorn, Machteld, Petersdorf, Effie W., Setterholm, Michelle, Champlin, Richard, Lee, Stephanie J., de Lima, Marcos
Gepubliceerd in 2013

Psoriasis Patients Are Enriched for Genetic Variants That Protect against HIV-1 Disease

door Chen, Haoyan, Hayashi, Genki, Lai, Olivia Y., Dilthey, Alexander, Kuebler, Peter J., Wong, Tami V., Martin, Maureen P., Fernandez Vina, Marcelo A., McVean, Gil, Wabl, Matthias, Leslie, Kieron S., Maurer, Toby, Martin, Jeffrey N., Deeks, Steven G., Carrington, Mary, Bowcock, Anne M., Nixon, Douglas F., Liao, Wilson
Gepubliceerd in 2012