A Genome-Scale Modeling Approach to Study Inborn Errors of Liver Metabolism: Toward an In Silico Patient

le Pagliarini, Roberto, di Bernardo, Diego
Foilsithe 2013

A Tool for Visualization and Analysis of Single-Cell RNA-Seq Data Based on Text Mining

le Gambardella, Gennaro, di Bernardo, Diego
Foilsithe in Front Genet (2019)

CoGemiR: A comparative genomics microRNA database

le Di Bernardo Diego, Maselli Vincenza, Banfi Sandro
Foilsithe 2008-10-01

CoGemiR: A comparative genomics microRNA database

le Maselli, Vincenza, Di Bernardo, Diego, Banfi, Sandro
Foilsithe 2008

A Parallel Implementation of the Network Identification by Multiple Regression (NIR) Algorithm to Reverse-Engineer Regulatory Gene Networks

le Gregoretti, Francesco, Belcastro, Vincenzo, di Bernardo, Diego, Oliva, Gennaro
Foilsithe 2010

Drug-set enrichment analysis: a novel tool to investigate drug mode of action

le Napolitano, Francesco, Sirci, Francesco, Carrella, Diego, di Bernardo, Diego
Foilsithe in Bioinformatics (2016)

Quantitative Characterization of α-Synuclein Aggregation in Living Cells through Automated Microfluidics Feedback Control

le Perrino, Giansimone, Wilson, Cathal, Santorelli, Marco, di Bernardo, Diego
Foilsithe in Cell Rep (2019)

Predicting Synthetic Gene Networks

le di Bernardo, Diego, Marucci, Lucia, Menolascina, Filippo, Siciliano, Velia
Foilsithe in Synthetic Gene Networks (2011)

gep2pep: a bioconductor package for the creation and analysis of pathway-based expression profiles

le Napolitano, Farancesco, Carrella, Diego, Gao, Xin, di Bernardo, Diego
Foilsithe in Bioinformatics (2020)

Computational framework for the prediction of transcription factor binding sites by multiple data integration

le Ambesi-Impiombato, Alberto, Bansal, Mukesh, Liò, Pietro, di Bernardo, Diego
Foilsithe 2006

How to infer gene networks from expression profiles

le Bansal, Mukesh, Belcastro, Vincenzo, Ambesi-Impiombato, Alberto, di Bernardo, Diego
Foilsithe 2007

How to infer gene networks from expression profiles

le Bansal, Mukesh, Belcastro, Vincenzo, Ambesi-Impiombato, Alberto, di Bernardo, Diego
Foilsithe 2007

A network-based approach to dissect the cilia/centrosome complex interactome

le Amato, Roberto, Morleo, Manuela, Giaquinto, Laura, di Bernardo, Diego, Franco, Brunella
Foilsithe 2014

Colocalization of Coregulated Genes: A Steered Molecular Dynamics Study of Human Chromosome 19

le Di Stefano, Marco, Rosa, Angelo, Belcastro, Vincenzo, di Bernardo, Diego, Micheletti, Cristian
Foilsithe 2013

A transcriptomic study of Williams-Beuren syndrome associated genes in mouse embryonic stem cells

le De Cegli, Rossella, Iacobacci, Simona, Fedele, Anthony, Ballabio, Andrea, di Bernardo, Diego
Foilsithe in Sci Data (2019)

Reverse Engineering Gene Network Identifies New Dysferlin-interacting Proteins

le Cacciottolo, Mafalda, Belcastro, Vincenzo, Laval, Steve, Bushby, Kate, di Bernardo, Diego, Nigro, Vincenzo
Foilsithe 2011

miRNAs confer phenotypic robustness to gene networks by suppressing biological noise

le Siciliano, Velia, Garzilli, Immacolata, Fracassi, Chiara, Criscuolo, Stefania, Ventre, Simona, di Bernardo, Diego
Foilsithe 2013

Modeling RNA interference in mammalian cells

le Cuccato, Giulia, Polynikis, Athanasios, Siciliano, Velia, Graziano, Mafalda, di Bernardo, Mario, di Bernardo, Diego
Foilsithe 2011

Direct targets of the TRP63 transcription factor revealed by a combination of gene expression profiling and reverse engineering

le Della Gatta, Giusy, Bansal, Mukesh, Ambesi-Impiombato, Alberto, Antonini, Dario, Missero, Caterina, di Bernardo, Diego
Foilsithe 2008

Differential network analysis for the identification of condition-specific pathway activity and regulation

le Gambardella, Gennaro, Moretti, Maria Nicoletta, de Cegli, Rossella, Cardone, Luca, Peron, Adriano, di Bernardo, Diego
Foilsithe 2013