Drug-set enrichment analysis: a novel tool to investigate drug mode of action

by Napolitano, Francesco, Sirci, Francesco, Carrella, Diego, di Bernardo, Diego
Published in Bioinformatics (2016)

gep2pep: a bioconductor package for the creation and analysis of pathway-based expression profiles

by Napolitano, Farancesco, Carrella, Diego, Gao, Xin, di Bernardo, Diego
Published in Bioinformatics (2020)

Comparing structural and transcriptional drug networks reveals signatures of drug activity and toxicity in transcriptional responses

by Sirci, Francesco, Napolitano, Francesco, Pisonero-Vaquero, Sandra, Carrella, Diego, Medina, Diego L., di Bernardo, Diego
Published in NPJ Syst Biol Appl (2017)

A community-based resource for automatic exome variant-calling and annotation in Mendelian disorders

by Mutarelli, Margherita, Marwah, Veer Singh, Rispoli, Rossella, Carrella, Diego, Dharmalingam, Gopuraja, Oliva, Gennaro, di Bernardo, Diego
Published 2014

High-resolution analysis of the human retina miRNome reveals isomiR variations and novel microRNAs

by Karali, Marianthi, Persico, Maria, Mutarelli, Margherita, Carissimo, Annamaria, Pizzo, Mariateresa, Singh Marwah, Veer, Ambrosio, Concetta, Pinelli, Michele, Carrella, Diego, Ferrari, Stefano, Ponzin, Diego, Nigro, Vincenzo, di Bernardo, Diego, Banfi, Sandro
Published in Nucleic Acids Res (2016)

Genetic and pharmacological regulation of the endocannabinoid CB1 receptor in Duchenne muscular dystrophy

by Iannotti, Fabio A., Pagano, Ester, Guardiola, Ombretta, Adinolfi, Simone, Saccone, Valentina, Consalvi, Silvia, Piscitelli, Fabiana, Gazzerro, Elisabetta, Busetto, Giuseppe, Carrella, Diego, Capasso, Raffaele, Puri, Pier Lorenzo, Minchiotti, Gabriella, Di Marzo, Vincenzo
Published in Nat Commun (2018)

Unravelling druggable signalling networks that control F508del-CFTR proteostasis

by Hegde, Ramanath Narayana, Parashuraman, Seetharaman, Iorio, Francesco, Ciciriello, Fabiana, Capuani, Fabrizio, Carissimo, Annamaria, Carrella, Diego, Belcastro, Vincenzo, Subramanian, Advait, Bounti, Laura, Persico, Maria, Carlile, Graeme, Galietta, Luis, Thomas, David Y, Di Bernardo, Diego, Luini, Alberto
Published in eLife (2015)

An atlas of gene expression and gene co-regulation in the human retina

by Pinelli, Michele, Carissimo, Annamaria, Cutillo, Luisa, Lai, Ching-Hung, Mutarelli, Margherita, Moretti, Maria Nicoletta, Singh, Marwah Veer, Karali, Marianthi, Carrella, Diego, Pizzo, Mariateresa, Russo, Francesco, Ferrari, Stefano, Ponzin, Diego, Angelini, Claudia, Banfi, Sandro, di Bernardo, Diego
Published in Nucleic Acids Res (2016)

Goblet Cell Hyperplasia Requires High Bicarbonate Transport To Support Mucin Release

by Gorrieri, Giulia, Scudieri, Paolo, Caci, Emanuela, Schiavon, Marco, Tomati, Valeria, Sirci, Francesco, Napolitano, Francesco, Carrella, Diego, Gianotti, Ambra, Musante, Ilaria, Favia, Maria, Casavola, Valeria, Guerra, Lorenzo, Rea, Federico, Ravazzolo, Roberto, Di Bernardo, Diego, Galietta, Luis J. V.
Published in Sci Rep (2016)

Computational drugs repositioning identifies inhibitors of oncogenic PI3K/AKT/P70S6K-dependent pathways among FDA-approved compounds

by Carrella, Diego, Manni, Isabella, Tumaini, Barbara, Dattilo, Rosanna, Papaccio, Federica, Mutarelli, Margherita, Sirci, Francesco, Amoreo, Carla A., Mottolese, Marcella, Iezzi, Manuela, Ciolli, Laura, Aria, Valentina, Bosotti, Roberta, Isacchi, Antonella, Loreni, Fabrizio, Bardelli, Alberto, Avvedimento, Vittorio E., di Bernardo, Diego, Cardone, Luca
Published in Oncotarget (2016)

Impaired mitophagy links mitochondrial disease to epithelial stress in methylmalonyl-CoA mutase deficiency

by Luciani, Alessandro, Schumann, Anke, Berquez, Marine, Chen, Zhiyong, Nieri, Daniela, Failli, Mario, Debaix, Huguette, Festa, Beatrice Paola, Tokonami, Natsuko, Raimondi, Andrea, Cremonesi, Alessio, Carrella, Diego, Forny, Patrick, Kölker, Stefan, Diomedi Camassei, Francesca, Diaz, Francisca, Moraes, Carlos T., Di Bernardo, Diego, Baumgartner, Matthias R., Devuyst, Olivier
Published in Nat Commun (2020)

Author Correction: Impaired mitophagy links mitochondrial disease to epithelial stress in methylmalonyl-CoA mutase deficiency

by Luciani, Alessandro, Schumann, Anke, Berquez, Marine, Chen, Zhiyong, Nieri, Daniela, Failli, Mario, Debaix, Huguette, Festa, Beatrice Paola, Tokonami, Natsuko, Raimondi, Andrea, Cremonesi, Alessio, Carrella, Diego, Forny, Patrick, Kölker, Stefan, Camassei, Francesca Diomedi, Diaz, Francisca, Moraes, Carlos T., Di Bernardo, Diego, Baumgartner, Matthias R., Devuyst, Olivier
Published in Nat Commun (2020)