ENABLING CLINICAL CANCER GENOMICS FOR RARE MUTATIONS: COLD-PCR MAGNIFIES MUTATIONS PRIOR TO TARGETED AMPLICON RE-SEQUENCING

di Milbury, Coren A., Correll, Mick, Quackenbush, John, Rubio, Renee, Makrigiorgos, G. Mike
Pubblicazione 2011

Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks

di Haibe-Kains, Benjamin, Olsen, Catharina, Djebbari, Amira, Bontempi, Gianluca, Correll, Mick, Bouton, Christopher, Quackenbush, John
Pubblicazione 2012

Brain and Testicular Tumors in Mice with Progenitor Cells Lacking BAX and BAK

di Katz, Samuel G., Fisher, Jill K., Correll, Mick, Bronson, Roderick T., Ligon, Keith L., Walensky, Loren D.
Pubblicazione 2012

Ovarian reserve status in young women is associated with altered gene expression in membrana granulosa cells

di Skiadas, Christine C., Duan, Shenghua, Correll, Mick, Rubio, Renee, Karaca, Nilay, Ginsburg, Elizabeth S., Quackenbush, John, Racowsky, Catherine
Pubblicazione 2012

CRX Is a Diagnostic Marker of Retinal and Pineal Lineage Tumors

di Santagata, Sandro, Maire, Cecile L., Idbaih, Ahmed, Geffers, Lars, Correll, Mick, Holton, Kristina, Quackenbush, John, Ligon, Keith L.
Pubblicazione 2009

Differentiating progressive from nonprogressive T1 bladder cancer by gene expression profiling: Applying RNA-sequencing analysis on archived specimens

di Lin, Xuanhui Sharron, Hu, Lan, Kirley, Sandy, Correll, Mick, Quackenbush, John, Wu, Chin-Lee, McDougal, William Scott
Pubblicato in Urol Oncol (2013)

Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: Preliminary assessment of cross-platform concordance

di Kelly, Andrew D., Hill, Katherine E., Correll, Mick, Hu, Lan, Wang, Yaoyu, Rubio, Renee, Duan, Shenghua, Quackenbush, John, Spentzos, Dimitrios
Pubblicazione 2013

Mutational analysis clopidogrel resistance and platelet function in patients scheduled for coronary artery bypass grafting

di Correll, Mick, Johnson, Christopher K., Ferrari, Giovanni, Brizzio, Mariano, Mak, Andrew W.C., Quackenbush, John, Shaw, Richard E., Zapolanski, Alex, Grau, Juan B.
Pubblicazione 2013

Alterations in Diversity of the Oral Microbiome in Pediatric Inflammatory Bowel Disease

di Docktor, Michael J., Paster, Bruce J., Abramowicz, Shelly, Ingram, Jay, Wang, Yaoyu E., Correll, Mick, Jiang, Hongyu, Cotton, Sean L., Kokaras, Alexis S., Bousvaros, Athos
Pubblicazione 2011

Outcomes of COVID‐19 in hospitalized solid organ transplant recipients compared to a matched cohort of non‐transplant patients at a national healthcare system in the United States...

di Fisher, Arielle M., Schlauch, Daniel, Mulloy, Matthew, Dao, Ann, Reyad, Ashraf I., Correll, Mick, Fromell, Gregg J., Pittman, James, Bingaman, Adam W., Sankarapandian, Balamurugan, Allam, Sridhar R.
Pubblicato in Clin Transplant (2021)

GeneSigDB—a curated database of gene expression signatures

di Culhane, Aedín C., Schwarzl, Thomas, Sultana, Razvan, Picard, Kermshlise C., Picard, Shaita C., Lu, Tim H., Franklin, Katherine R., French, Simon J., Papenhausen, Gerald, Correll, Mick, Quackenbush, John
Pubblicazione 2010

A microRNA activity map of human mesenchymal tumors: connections to oncogenic pathways; an integrative transcriptomic study

di Fountzilas, Elena, Kelly, Andrew D, Perez-Atayde, Antonio R, Goldsmith, Jeffrey, Konstantinopoulos, Panagiotis A, Francoeur, Nancy, Correll, Mick, Rubio, Renee, Hu, Lan, Gebhardt, Mark C, Quackenbush, John, Spentzos, Dimitrios
Pubblicazione 2012

Live Attenuated Rev-Independent Nef¯SIV Enhances Acquisition of Heterologous SIVsmE660 in Acutely Vaccinated Rhesus Macaques

di Byrareddy, Siddappa N., Ayash-Rashkovsky, Mila, Kramer, Victor G., Lee, Sandra J., Correll, Mick, Novembre, Francis J., Villinger, Francois, Johnson, Welkin E., von Gegerfelt, Agneta, Felber, Barbara K., Ruprecht, Ruth M.
Pubblicazione 2013

CXCR4 pathway associated with family history of melanoma

di Li, Wen-Qing, Han, Jiali, Widlund, Hans R., Correll, Mick, Wang, Yaoyu E., Quackenbush, John, Mihm, Martin C., Canales, Alvaro Laga, Wu, Shaowei, Golub, Todd, Hoshida, Yujin, Hunter, David J., Murphy, George, Kupper, Thomas S., Qureshi, Abrar A.
Pubblicazione 2013

Comprehensive genomic profiling of the lung transcriptome in emphysema and idiopathic pulmonary fibrosis using RNA-Seq

di Kusko, Rebecca L, Brothers, John, Liu, Gang, Luo, Lingqi, Guardela, Brenda Juan, Tedrow, John, Aleksyev, Yuriy, Yang, Ivana V, Correll, Mick, Geraci, Mark, Quackenbush, John, Sciurba, Frank, Lenburg, Marc, Schwartz, David A, Beane, Jennifer, Kaminski, Naftali, Spira, Avrum
Pubblicazione 2012

Moving beyond gene expression: identification of lung-disease-associated novel transcripts and alternative splicing by RNA sequencing

di Brothers, John, Kusko, Rebecca, Liu, Gang, Luo, Lingqi, Guardela, Brenda Juan, Tedrow, John, Alekesyev, Yuriy, Yang, Ivana V, Correll, Mick, Geraci, Mark, Quackenbush, John, Sciurba, Frank, Sebastiani, Paola, Lenburg, Marc, Kaminski, Naftali, Schwartz, David A, Spira, Avrum, Beane, Jennifer
Pubblicazione 2012

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures

di Culhane, Aedín C., Schröder, Markus S., Sultana, Razvan, Picard, Shaita C., Martinelli, Enzo N., Kelly, Caroline, Haibe-Kains, Benjamin, Kapushesky, Misha, St Pierre, Anne-Alyssa, Flahive, William, Picard, Kermshlise C., Gusenleitner, Daniel, Papenhausen, Gerald, O'Connor, Niall, Correll, Mick, Quackenbush, John
Pubblicazione 2012

A function for cyclin D1 in DNA repair uncovered by interactome analyses in human cancers

di Jirawatnotai, Siwanon, Hu, Yiduo, Michowski, Wojciech, Elias, Joshua E., Becks, Lisa, Bienvenu, Frederic, Zagozdzon, Agnieszka, Goswami, Tapasree, Wang, Yaoyu E., Clark, Alan B., Kunkel, Thomas A., van Harn, Tanja, Xia, Bing, Correll, Mick, Quackenbush, John, Livingston, David M., Gygi, Steven P., Sicinski, Piotr
Pubblicazione 2011

Characterizing the small RNA transcriptome associated with COPD and ILD using next-generation sequencing

di Campbell, Joshua D, Luo, Lingqi, Liu, Gang, Xiao, Ji, Gerrein, Joseph, Guardela, Brenda J, Tedrow, John, Aleksyev, Yuriy O, Yang, Ivana V, Correll, Mick, Geraci, Mark, Quackenbush, John, Sciurba, Frank, Schwartz, David A, Kaminski, Naftali, Lenburg, Marc E, Beane, Jennifer, Spira, Avrum
Pubblicazione 2012

Integrative Genomic Analysis Implicates Gain of PIK3CA at 3q26 and MYC at 8q24 in Chronic Lymphocytic Leukemia

di Brown, Jennifer R, Hanna, Megan, Tesar, Bethany, Werner, Lillian, Pochet, Nathalie, Asara, John M., Wang, Yaoyu E, Cin, Paola dal, Fernandes, Stacey M, Thompson, Christina, MacConaill, Laura, Wu, Catherine J, Van de Peer, Yves, Correll, Mick, Regev, Aviv, Neuberg, Donna, Freedman, Arnold S
Pubblicazione 2012