ENABLING CLINICAL CANCER GENOMICS FOR RARE MUTATIONS: COLD-PCR MAGNIFIES MUTATIONS PRIOR TO TARGETED AMPLICON RE-SEQUENCING

por Milbury, Coren A., Correll, Mick, Quackenbush, John, Rubio, Renee, Makrigiorgos, G. Mike
Publicado 2011

Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks

por Haibe-Kains, Benjamin, Olsen, Catharina, Djebbari, Amira, Bontempi, Gianluca, Correll, Mick, Bouton, Christopher, Quackenbush, John
Publicado 2012

Brain and Testicular Tumors in Mice with Progenitor Cells Lacking BAX and BAK

por Katz, Samuel G., Fisher, Jill K., Correll, Mick, Bronson, Roderick T., Ligon, Keith L., Walensky, Loren D.
Publicado 2012

Ovarian reserve status in young women is associated with altered gene expression in membrana granulosa cells

por Skiadas, Christine C., Duan, Shenghua, Correll, Mick, Rubio, Renee, Karaca, Nilay, Ginsburg, Elizabeth S., Quackenbush, John, Racowsky, Catherine
Publicado 2012

CRX Is a Diagnostic Marker of Retinal and Pineal Lineage Tumors

por Santagata, Sandro, Maire, Cecile L., Idbaih, Ahmed, Geffers, Lars, Correll, Mick, Holton, Kristina, Quackenbush, John, Ligon, Keith L.
Publicado 2009

Differentiating progressive from nonprogressive T1 bladder cancer by gene expression profiling: Applying RNA-sequencing analysis on archived specimens

por Lin, Xuanhui Sharron, Hu, Lan, Kirley, Sandy, Correll, Mick, Quackenbush, John, Wu, Chin-Lee, McDougal, William Scott
Publicado en Urol Oncol (2013)

Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: Preliminary assessment of cross-platform concordance

por Kelly, Andrew D., Hill, Katherine E., Correll, Mick, Hu, Lan, Wang, Yaoyu, Rubio, Renee, Duan, Shenghua, Quackenbush, John, Spentzos, Dimitrios
Publicado 2013

Mutational analysis clopidogrel resistance and platelet function in patients scheduled for coronary artery bypass grafting

por Correll, Mick, Johnson, Christopher K., Ferrari, Giovanni, Brizzio, Mariano, Mak, Andrew W.C., Quackenbush, John, Shaw, Richard E., Zapolanski, Alex, Grau, Juan B.
Publicado 2013

Alterations in Diversity of the Oral Microbiome in Pediatric Inflammatory Bowel Disease

por Docktor, Michael J., Paster, Bruce J., Abramowicz, Shelly, Ingram, Jay, Wang, Yaoyu E., Correll, Mick, Jiang, Hongyu, Cotton, Sean L., Kokaras, Alexis S., Bousvaros, Athos
Publicado 2011

Outcomes of COVID‐19 in hospitalized solid organ transplant recipients compared to a matched cohort of non‐transplant patients at a national healthcare system in the United States...

por Fisher, Arielle M., Schlauch, Daniel, Mulloy, Matthew, Dao, Ann, Reyad, Ashraf I., Correll, Mick, Fromell, Gregg J., Pittman, James, Bingaman, Adam W., Sankarapandian, Balamurugan, Allam, Sridhar R.
Publicado en Clin Transplant (2021)

GeneSigDB—a curated database of gene expression signatures

por Culhane, Aedín C., Schwarzl, Thomas, Sultana, Razvan, Picard, Kermshlise C., Picard, Shaita C., Lu, Tim H., Franklin, Katherine R., French, Simon J., Papenhausen, Gerald, Correll, Mick, Quackenbush, John
Publicado 2010

A microRNA activity map of human mesenchymal tumors: connections to oncogenic pathways; an integrative transcriptomic study

por Fountzilas, Elena, Kelly, Andrew D, Perez-Atayde, Antonio R, Goldsmith, Jeffrey, Konstantinopoulos, Panagiotis A, Francoeur, Nancy, Correll, Mick, Rubio, Renee, Hu, Lan, Gebhardt, Mark C, Quackenbush, John, Spentzos, Dimitrios
Publicado 2012

Live Attenuated Rev-Independent Nef¯SIV Enhances Acquisition of Heterologous SIVsmE660 in Acutely Vaccinated Rhesus Macaques

por Byrareddy, Siddappa N., Ayash-Rashkovsky, Mila, Kramer, Victor G., Lee, Sandra J., Correll, Mick, Novembre, Francis J., Villinger, Francois, Johnson, Welkin E., von Gegerfelt, Agneta, Felber, Barbara K., Ruprecht, Ruth M.
Publicado 2013

CXCR4 pathway associated with family history of melanoma

por Li, Wen-Qing, Han, Jiali, Widlund, Hans R., Correll, Mick, Wang, Yaoyu E., Quackenbush, John, Mihm, Martin C., Canales, Alvaro Laga, Wu, Shaowei, Golub, Todd, Hoshida, Yujin, Hunter, David J., Murphy, George, Kupper, Thomas S., Qureshi, Abrar A.
Publicado 2013

Comprehensive genomic profiling of the lung transcriptome in emphysema and idiopathic pulmonary fibrosis using RNA-Seq

por Kusko, Rebecca L, Brothers, John, Liu, Gang, Luo, Lingqi, Guardela, Brenda Juan, Tedrow, John, Aleksyev, Yuriy, Yang, Ivana V, Correll, Mick, Geraci, Mark, Quackenbush, John, Sciurba, Frank, Lenburg, Marc, Schwartz, David A, Beane, Jennifer, Kaminski, Naftali, Spira, Avrum
Publicado 2012

Moving beyond gene expression: identification of lung-disease-associated novel transcripts and alternative splicing by RNA sequencing

por Brothers, John, Kusko, Rebecca, Liu, Gang, Luo, Lingqi, Guardela, Brenda Juan, Tedrow, John, Alekesyev, Yuriy, Yang, Ivana V, Correll, Mick, Geraci, Mark, Quackenbush, John, Sciurba, Frank, Sebastiani, Paola, Lenburg, Marc, Kaminski, Naftali, Schwartz, David A, Spira, Avrum, Beane, Jennifer
Publicado 2012

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures

por Culhane, Aedín C., Schröder, Markus S., Sultana, Razvan, Picard, Shaita C., Martinelli, Enzo N., Kelly, Caroline, Haibe-Kains, Benjamin, Kapushesky, Misha, St Pierre, Anne-Alyssa, Flahive, William, Picard, Kermshlise C., Gusenleitner, Daniel, Papenhausen, Gerald, O'Connor, Niall, Correll, Mick, Quackenbush, John
Publicado 2012

A function for cyclin D1 in DNA repair uncovered by interactome analyses in human cancers

por Jirawatnotai, Siwanon, Hu, Yiduo, Michowski, Wojciech, Elias, Joshua E., Becks, Lisa, Bienvenu, Frederic, Zagozdzon, Agnieszka, Goswami, Tapasree, Wang, Yaoyu E., Clark, Alan B., Kunkel, Thomas A., van Harn, Tanja, Xia, Bing, Correll, Mick, Quackenbush, John, Livingston, David M., Gygi, Steven P., Sicinski, Piotr
Publicado 2011

Characterizing the small RNA transcriptome associated with COPD and ILD using next-generation sequencing

por Campbell, Joshua D, Luo, Lingqi, Liu, Gang, Xiao, Ji, Gerrein, Joseph, Guardela, Brenda J, Tedrow, John, Aleksyev, Yuriy O, Yang, Ivana V, Correll, Mick, Geraci, Mark, Quackenbush, John, Sciurba, Frank, Schwartz, David A, Kaminski, Naftali, Lenburg, Marc E, Beane, Jennifer, Spira, Avrum
Publicado 2012

Integrative Genomic Analysis Implicates Gain of PIK3CA at 3q26 and MYC at 8q24 in Chronic Lymphocytic Leukemia

por Brown, Jennifer R, Hanna, Megan, Tesar, Bethany, Werner, Lillian, Pochet, Nathalie, Asara, John M., Wang, Yaoyu E, Cin, Paola dal, Fernandes, Stacey M, Thompson, Christina, MacConaill, Laura, Wu, Catherine J, Van de Peer, Yves, Correll, Mick, Regev, Aviv, Neuberg, Donna, Freedman, Arnold S
Publicado 2012